Pagala V - Search Results

1

Deep Multilayer Brain Proteomics Identifies Molecular Networks in Alzheimer's Disease Progression.

Bai B, Wang X, Li Y, Chen PC, Yu K, Dey KK, Yarbro JM, Han X, Lutz BM, Rao S, Jiao Y, Sifford JM, Han J, Wang M, Tan H, Shaw TI, Cho JH, Zhou S, Wang H, Niu M, Mancieri A, Messler KA, Sun X, Wu Z, Pagala V, High AA, Bi W, Zhang H, Chi H, Haroutunian V, Zhang B, Beach TG, Yu G, Peng J. Bai B, et al. Among authors: pagala v. Neuron. 2020 Mar 18;105(6):975-991.e7. doi: 10.1016/j.neuron.2019.12.015. Epub 2020 Jan 8. Neuron. 2020. PMID: 31926610 Free PMC article.

2

Exercise protects against MPTP-induced neurotoxicity in mice.

Gerecke KM, Jiao Y, Pani A, Pagala V, Smeyne RJ. Gerecke KM, et al. Among authors: pagala v. Brain Res. 2010 Jun 23;1341:72-83. doi: 10.1016/j.brainres.2010.01.053. Epub 2010 Jan 29. Brain Res. 2010. PMID: 20116369 Free PMC article.

3

Integrated approaches for analyzing U1-70K cleavage in Alzheimer's disease.

Bai B, Chen PC, Hales CM, Wu Z, Pagala V, High AA, Levey AI, Lah JJ, Peng J. Bai B, et al. Among authors: pagala v. J Proteome Res. 2014 Nov 7;13(11):4526-34. doi: 10.1021/pr5003593. Epub 2014 Jun 13. J Proteome Res. 2014. PMID: 24902715 Free PMC article.

4

Quantitative protein analysis by mass spectrometry.

Pagala VR, High AA, Wang X, Tan H, Kodali K, Mishra A, Kavdia K, Xu Y, Wu Z, Peng J. Pagala VR, et al. Methods Mol Biol. 2015;1278:281-305. doi: 10.1007/978-1-4939-2425-7_17. Methods Mol Biol. 2015. PMID: 25859956

5

Sequential Elution Interactome Analysis of the Mind Bomb 1 Ubiquitin Ligase Reveals a Novel Role in Dendritic Spine Outgrowth.

Mertz J, Tan H, Pagala V, Bai B, Chen PC, Li Y, Cho JH, Shaw T, Wang X, Peng J. Mertz J, et al. Among authors: pagala v. Mol Cell Proteomics. 2015 Jul;14(7):1898-910. doi: 10.1074/mcp.M114.045898. Epub 2015 Apr 30. Mol Cell Proteomics. 2015. PMID: 25931508 Free PMC article.

6

PAX7 is a required target for microRNA-206-induced differentiation of fusion-negative rhabdomyosarcoma.

Hanna JA, Garcia MR, Go JC, Finkelstein D, Kodali K, Pagala V, Wang X, Peng J, Hatley ME. Hanna JA, et al. Among authors: pagala v. Cell Death Dis. 2016 Jun 9;7(6):e2256. doi: 10.1038/cddis.2016.159. Cell Death Dis. 2016. PMID: 27277678 Free PMC article.

7

Deep Profiling of Proteome and Phosphoproteome by Isobaric Labeling, Extensive Liquid Chromatography, and Mass Spectrometry.

Bai B, Tan H, Pagala VR, High AA, Ichhaporia VP, Hendershot L, Peng J. Bai B, et al. Among authors: pagala vr. Methods Enzymol. 2017;585:377-395. doi: 10.1016/bs.mie.2016.10.007. Epub 2016 Dec 24. Methods Enzymol. 2017. PMID: 28109439 Free PMC article.

8

Extensive Peptide Fractionation and y₁ Ion-Based Interference Detection Method for Enabling Accurate Quantification by Isobaric Labeling and Mass Spectrometry.

Niu M, Cho JH, Kodali K, Pagala V, High AA, Wang H, Wu Z, Li Y, Bi W, Zhang H, Wang X, Zou W, Peng J. Niu M, et al. Among authors: pagala v. Anal Chem. 2017 Mar 7;89(5):2956-2963. doi: 10.1021/acs.analchem.6b04415. Epub 2017 Feb 22. Anal Chem. 2017. PMID: 28194965 Free PMC article.

9

Deep Proteome Profiling by Isobaric Labeling, Extensive Liquid Chromatography, Mass Spectrometry, and Software-assisted Quantification.

High AA, Tan H, Pagala VR, Niu M, Cho JH, Wang X, Bai B, Peng J. High AA, et al. J Vis Exp. 2017 Nov 15;(129):56474. doi: 10.3791/56474. J Vis Exp. 2017. PMID: 29286450 Free PMC article.

10

Spectral Library Search Improves Assignment of TMT Labeled MS/MS Spectra.

Shen J, Pagala VR, Breuer AM, Peng J, Bin Ma, Wang X. Shen J, et al. J Proteome Res. 2018 Sep 7;17(9):3325-3331. doi: 10.1021/acs.jproteome.8b00594. Epub 2018 Aug 16. J Proteome Res. 2018. PMID: 30096983 Free PMC article.

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