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Rapid cross-border emergence of NDM-5-producing Escherichia coli in the European Union/European Economic Area, 2012 to June 2022.
Linkevicius M, Bonnin RA, Alm E, Svartström O, Apfalter P, Hartl R, Hasman H, Roer L, Räisänen K, Dortet L, Pfennigwerth N, Hans JB, Tóth Á, Buzgó L, Cormican M, Delappe N, Monaco M, Giufrè M, Hendrickx AP, Samuelsen Ø, Pöntinen AK, Caniça M, Manageiro V, Oteo-Iglesias J, Pérez-Vázquez M, Westmo K, Mäkitalo B, Palm D, Monnet DL, Kohlenberg A. Linkevicius M, et al. Among authors: pontinen ak. Euro Surveill. 2023 May;28(19):2300209. doi: 10.2807/1560-7917.ES.2023.28.19.2300209. Euro Surveill. 2023. PMID: 37166762 Free PMC article.
Emergence and dissemination of antimicrobial resistance in Escherichia coli causing bloodstream infections in Norway in 2002-17: a nationwide, longitudinal, microbial population genomic study.
Gladstone RA, McNally A, Pöntinen AK, Tonkin-Hill G, Lees JA, Skytén K, Cléon F, Christensen MOK, Haldorsen BC, Bye KK, Gammelsrud KW, Hjetland R, Kümmel A, Larsen HE, Lindemann PC, Löhr IH, Marvik Å, Nilsen E, Noer MT, Simonsen GS, Steinbakk M, Tofteland S, Vattøy M, Bentley SD, Croucher NJ, Parkhill J, Johnsen PJ, Samuelsen Ø, Corander J. Gladstone RA, et al. Among authors: pontinen ak. Lancet Microbe. 2021 Jul;2(7):e331-e341. doi: 10.1016/S2666-5247(21)00031-8. Epub 2021 May 10. Lancet Microbe. 2021. PMID: 35544167 Free PMC article.
Community carriage of ESBL-producing Escherichia coli and Klebsiella pneumoniae: a cross-sectional study of risk factors and comparative genomics of carriage and clinical isolates.
Raffelsberger N, Buczek DJ, Svendsen K, Småbrekke L, Pöntinen AK, Löhr IH, Andreassen LLE, Simonsen GS; Norwegian E. coli ESBL Study Group; Sundsfjord A, Gravningen K, Samuelsen Ø. Raffelsberger N, et al. Among authors: pontinen ak. mSphere. 2023 Aug 24;8(4):e0002523. doi: 10.1128/msphere.00025-23. Epub 2023 Jun 12. mSphere. 2023. PMID: 37306968 Free PMC article.
Evolutionary and functional history of the Escherichia coli K1 capsule.
Arredondo-Alonso S, Blundell-Hunter G, Fu Z, Gladstone RA, Fillol-Salom A, Loraine J, Cloutman-Green E, Johnsen PJ, Samuelsen Ø, Pöntinen AK, Cléon F, Chavez-Bueno S, De la Cruz MA, Ares MA, Vongsouvath M, Chmielarczyk A, Horner C, Klein N, McNally A, Reis JN, Penadés JR, Thomson NR, Corander J, Taylor PW, McCarthy AJ. Arredondo-Alonso S, et al. Among authors: pontinen ak. Nat Commun. 2023 Jun 15;14(1):3294. doi: 10.1038/s41467-023-39052-w. Nat Commun. 2023. PMID: 37322051 Free PMC article.
Mge-cluster: a reference-free approach for typing bacterial plasmids.
Arredondo-Alonso S, Gladstone RA, Pöntinen AK, Gama JA, Schürch AC, Lanza VF, Johnsen PJ, Samuelsen Ø, Tonkin-Hill G, Corander J. Arredondo-Alonso S, et al. Among authors: pontinen ak. NAR Genom Bioinform. 2023 Jul 10;5(3):lqad066. doi: 10.1093/nargab/lqad066. eCollection 2023 Sep. NAR Genom Bioinform. 2023. PMID: 37435357 Free PMC article.
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