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Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients.
Diray-Arce J, Fourati S, Doni Jayavelu N, Patel R, Maguire C, Chang AC, Dandekar R, Qi J, Lee BH, van Zalm P, Schroeder A, Chen E, Konstorum A, Brito A, Gygi JP, Kho A, Chen J, Pawar S, Gonzalez-Reiche AS, Hoch A, Milliren CE, Overton JA, Westendorf K; IMPACC Network; Cairns CB, Rouphael N, Bosinger SE, Kim-Schulze S, Krammer F, Rosen L, Grubaugh ND, van Bakel H, Wilson M, Rajan J, Steen H, Eckalbar W, Cotsapas C, Langelier CR, Levy O, Altman MC, Maecker H, Montgomery RR, Haddad EK, Sekaly RP, Esserman D, Ozonoff A, Becker PM, Augustine AD, Guan L, Peters B, Kleinstein SH. Diray-Arce J, et al. Among authors: overton ja. Cell Rep Med. 2023 Jun 20;4(6):101079. doi: 10.1016/j.xcrm.2023.101079. Epub 2023 May 23. Cell Rep Med. 2023. PMID: 37327781 Free PMC article.
Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: Results from the IMPACC study.
Ozonoff A, Schaenman J, Jayavelu ND, Milliren CE, Calfee CS, Cairns CB, Kraft M, Baden LR, Shaw AC, Krammer F, van Bakel H, Esserman DA, Liu S, Sesma AF, Simon V, Hafler DA, Montgomery RR, Kleinstein SH, Levy O, Bime C, Haddad EK, Erle DJ, Pulendran B, Nadeau KC, Davis MM, Hough CL, Messer WB, Higuita NIA, Metcalf JP, Atkinson MA, Brakenridge SC, Corry D, Kheradmand F, Ehrlich LIR, Melamed E, McComsey GA, Sekaly R, Diray-Arce J, Peters B, Augustine AD, Reed EF, Altman MC, Becker PM, Rouphael N; IMPACC study group members. Ozonoff A, et al. EBioMedicine. 2022 Sep;83:104208. doi: 10.1016/j.ebiom.2022.104208. Epub 2022 Aug 8. EBioMedicine. 2022. PMID: 35952496 Free PMC article.
Identification of errors in the IEDB using ontologies.
Vita R, Overton JA, Peters B. Vita R, et al. Among authors: overton ja. Database (Oxford). 2018 Jan 1;2018:bay005. doi: 10.1093/database/bay005. Database (Oxford). 2018. PMID: 29688357 Free PMC article.
A structured model for immune exposures.
Vita R, Overton JA, Dunn P, Cheung KH, Kleinstein SH, Sette A, Peters B. Vita R, et al. Among authors: overton ja. Database (Oxford). 2020 Jan 1;2020:baaa016. doi: 10.1093/database/baaa016. Database (Oxford). 2020. PMID: 32283555 Free PMC article.
An immunologically friendly classification of non-peptidic ligands.
Edwards L, Jackson R, Overton JA, Vita R, Blazeska N, Peters B, Sette A. Edwards L, et al. Among authors: overton ja. Database (Oxford). 2021 Mar 27;2021:baab014. doi: 10.1093/database/baab014. Database (Oxford). 2021. PMID: 33772585 Free PMC article.
The Immune Epitope Database (IEDB): 2018 update.
Vita R, Mahajan S, Overton JA, Dhanda SK, Martini S, Cantrell JR, Wheeler DK, Sette A, Peters B. Vita R, et al. Among authors: overton ja. Nucleic Acids Res. 2019 Jan 8;47(D1):D339-D343. doi: 10.1093/nar/gky1006. Nucleic Acids Res. 2019. PMID: 30357391 Free PMC article.
38 results