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The IMG/M data management and analysis system v.7: content updates and new features.
Chen IA, Chu K, Palaniappan K, Ratner A, Huang J, Huntemann M, Hajek P, Ritter SJ, Webb C, Wu D, Varghese NJ, Reddy TBK, Mukherjee S, Ovchinnikova G, Nolan M, Seshadri R, Roux S, Visel A, Woyke T, Eloe-Fadrosh EA, Kyrpides NC, Ivanova NN. Chen IA, et al. Among authors: ovchinnikova g. Nucleic Acids Res. 2023 Jan 6;51(D1):D723-D732. doi: 10.1093/nar/gkac976. Nucleic Acids Res. 2023. PMID: 36382399 Free PMC article.
Genome sequence of the 1,4-dioxane-degrading Pseudonocardia dioxanivorans strain CB1190.
Sales CM, Mahendra S, Grostern A, Parales RE, Goodwin LA, Woyke T, Nolan M, Lapidus A, Chertkov O, Ovchinnikova G, Sczyrba A, Alvarez-Cohen L. Sales CM, et al. Among authors: ovchinnikova g. J Bacteriol. 2011 Sep;193(17):4549-50. doi: 10.1128/JB.00415-11. Epub 2011 Jul 1. J Bacteriol. 2011. PMID: 21725009 Free PMC article.
Complete Genome Sequence of Paenibacillus strain Y4.12MC10, a Novel Paenibacillus lautus strain Isolated from Obsidian Hot Spring in Yellowstone National Park.
Mead DA, Lucas S, Copeland A, Lapidus A, Cheng JF, Bruce DC, Goodwin LA, Pitluck S, Chertkov O, Zhang X, Detter JC, Han CS, Tapia R, Land M, Hauser LJ, Chang YJ, Kyrpides NC, Ivanova NN, Ovchinnikova G, Woyke T, Brumm C, Hochstein R, Schoenfeld T, Brumm P. Mead DA, et al. Among authors: ovchinnikova g. Stand Genomic Sci. 2012 Jul 30;6(3):381-400. doi: 10.4056/sigs.2605792. Epub 2012 Jul 27. Stand Genomic Sci. 2012. PMID: 23408395 Free PMC article.
Genome sequence of the clover-nodulating Rhizobium leguminosarum bv. trifolii strain TA1.
Reeve W, Tian R, De Meyer S, Melino V, Terpolilli J, Ardley J, Tiwari R, Howieson J, Yates R, O'Hara G, Ninawi M, Teshima H, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Ivanova N, Ovchinnikova G, Pagani I, Pati A, Goodwin L, Pitluck S, Woyke T, Kyrpides N. Reeve W, et al. Among authors: ovchinnikova g. Stand Genomic Sci. 2013 Dec 15;9(2):243-53. doi: 10.4056/sigs.4488254. eCollection 2013 Dec 20. Stand Genomic Sci. 2013. PMID: 24976881 Free PMC article.
Genome sequence of the South American clover-nodulating Rhizobium leguminosarum bv. trifolii strain WSM597.
Reeve W, Terpolilli J, Melino V, Ardley J, Tian R, De Meyer S, Tiwari R, Yates R, O'Hara G, Howieson J, Ninawi M, Held B, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Ivanova N, Ovchinnikova G, Pagani I, Pati A, Goodwin L, Woyke T, Kyrpides N. Reeve W, et al. Among authors: ovchinnikova g. Stand Genomic Sci. 2013 Dec 15;9(2):264-72. doi: 10.4056/sigs.4508258. eCollection 2013 Dec 20. Stand Genomic Sci. 2013. PMID: 24976883 Free PMC article.
Genome sequence of the lupin-nodulating Bradyrhizobium sp. strain WSM1417.
Reeve W, Terpolilli J, Melino V, Ardley J, Tian R, De Meyer S, Tiwari R, Yates R, O'Hara G, Howieson J, Ninawi M, Teshima H, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavrommatis K, Markowitz V, Ivanova N, Ovchinnikova G, Pagani I, Pati A, Goodwin L, Peters L, Woyke T, Kyrpides N. Reeve W, et al. Among authors: ovchinnikova g. Stand Genomic Sci. 2013 Dec 15;9(2):273-82. doi: 10.4056/sigs.4518260. eCollection 2013 Dec 20. Stand Genomic Sci. 2013. PMID: 24976884 Free PMC article.
Genome sequence of the Lebeckia ambigua-nodulating "Burkholderia sprentiae" strain WSM5005(T.).
Reeve W, De Meyer S, Terpolilli J, Melino V, Ardley J, Rui T, Tiwari R, Howieson J, Yates R, O'Hara G, Lu M, Bruce D, Detter C, Tapia R, Han C, Wei CL, Huntemann M, Han J, Chen IM, Mavromatis K, Markowitz V, Szeto E, Ivanova N, Mikhailova N, Ovchinnikova G, Pagani I, Pati A, Goodwin L, Peters L, Pitluck S, Woyke T, Kyrpides N. Reeve W, et al. Among authors: ovchinnikova g. Stand Genomic Sci. 2013 Dec 15;9(2):385-94. doi: 10.4056/sigs.4558268. eCollection 2013 Dec 20. Stand Genomic Sci. 2013. PMID: 24976894 Free PMC article.
The complete genome sequence of Clostridium indolis DSM 755(T.).
Biddle AS, Leschine S, Huntemann M, Han J, Chen A, Kyrpides N, Markowitz V, Palaniappan K, Ivanova N, Mikhailova N, Ovchinnikova G, Schaumberg A, Pati A, Stamatis D, Reddy T, Lobos E, Goodwin L, Nordberg HP, Cantor MN, Hua SX, Woyke T, Blanchard JL. Biddle AS, et al. Among authors: ovchinnikova g. Stand Genomic Sci. 2014 Mar 18;9(3):1089-104. doi: 10.4056/sigs.5281010. eCollection 2014 Jun 15. Stand Genomic Sci. 2014. PMID: 25197485 Free PMC article.
Draft genome sequences of 10 strains of the genus exiguobacterium.
Vishnivetskaya TA, Chauhan A, Layton AC, Pfiffner SM, Huntemann M, Copeland A, Chen A, Kyrpides NC, Markowitz VM, Palaniappan K, Ivanova N, Mikhailova N, Ovchinnikova G, Andersen EW, Pati A, Stamatis D, Reddy TB, Shapiro N, Nordberg HP, Cantor MN, Hua XS, Woyke T. Vishnivetskaya TA, et al. Among authors: ovchinnikova g. Genome Announc. 2014 Oct 16;2(5):e01058-14. doi: 10.1128/genomeA.01058-14. Genome Announc. 2014. PMID: 25323723 Free PMC article.
88 results