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Seqenv: linking sequences to environments through text mining.
Sinclair L, Ijaz UZ, Jensen LJ, Coolen MJL, Gubry-Rangin C, Chroňáková A, Oulas A, Pavloudi C, Schnetzer J, Weimann A, Ijaz A, Eiler A, Quince C, Pafilis E. Sinclair L, et al. Among authors: oulas a. PeerJ. 2016 Dec 20;4:e2690. doi: 10.7717/peerj.2690. eCollection 2016. PeerJ. 2016. PMID: 28028456 Free PMC article.
Optimized R functions for analysis of ecological community data using the R virtual laboratory (RvLab).
Varsos C, Patkos T, Oulas A, Pavloudi C, Gougousis A, Ijaz UZ, Filiopoulou I, Pattakos N, Vanden Berghe E, Fernández-Guerra A, Faulwetter S, Chatzinikolaou E, Pafilis E, Bekiari C, Doerr M, Arvanitidis C. Varsos C, et al. Among authors: oulas a. Biodivers Data J. 2016 Nov 1;(4):e8357. doi: 10.3897/BDJ.4.e8357. eCollection 2016. Biodivers Data J. 2016. PMID: 27932907 Free PMC article.
Exploring microbial functional biodiversity at the protein family level-From metagenomic sequence reads to annotated protein clusters.
Baltoumas FA, Karatzas E, Paez-Espino D, Venetsianou NK, Aplakidou E, Oulas A, Finn RD, Ovchinnikov S, Pafilis E, Kyrpides NC, Pavlopoulos GA. Baltoumas FA, et al. Among authors: oulas a. Front Bioinform. 2023 Mar 3;3:1157956. doi: 10.3389/fbinf.2023.1157956. eCollection 2023. Front Bioinform. 2023. PMID: 36959975 Free PMC article. Review.
Prediction of miRNA targets.
Oulas A, Karathanasis N, Louloupi A, Pavlopoulos GA, Poirazi P, Kalantidis K, Iliopoulos I. Oulas A, et al. Methods Mol Biol. 2015;1269:207-29. doi: 10.1007/978-1-4939-2291-8_13. Methods Mol Biol. 2015. PMID: 25577381 Review.
Impaired clearance of apoptotic cells leads to HMGB1 release in the bone marrow of patients with myelodysplastic syndromes and induces TLR4-mediated cytokine production.
Velegraki M, Papakonstanti E, Mavroudi I, Psyllaki M, Tsatsanis C, Oulas A, Iliopoulos I, Katonis P, Papadaki HA. Velegraki M, et al. Among authors: oulas a. Haematologica. 2013 Aug;98(8):1206-15. doi: 10.3324/haematol.2012.064642. Epub 2013 Feb 12. Haematologica. 2013. PMID: 23403315 Free PMC article.
49 results