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Metagenomic investigation of the geologically unique Hellenic Volcanic Arc reveals a distinctive ecosystem with unexpected physiology.
Oulas A, Polymenakou PN, Seshadri R, Tripp HJ, Mandalakis M, Paez-Espino AD, Pati A, Chain P, Nomikou P, Carey S, Kilias S, Christakis C, Kotoulas G, Magoulas A, Ivanova NN, Kyrpides NC. Oulas A, et al. Environ Microbiol. 2016 Apr;18(4):1122-36. doi: 10.1111/1462-2920.13095. Epub 2015 Dec 21. Environ Microbiol. 2016. PMID: 26487573
Exploring microbial functional biodiversity at the protein family level-From metagenomic sequence reads to annotated protein clusters.
Baltoumas FA, Karatzas E, Paez-Espino D, Venetsianou NK, Aplakidou E, Oulas A, Finn RD, Ovchinnikov S, Pafilis E, Kyrpides NC, Pavlopoulos GA. Baltoumas FA, et al. Among authors: oulas a. Front Bioinform. 2023 Mar 3;3:1157956. doi: 10.3389/fbinf.2023.1157956. eCollection 2023. Front Bioinform. 2023. PMID: 36959975 Free PMC article. Review.
Prediction of miRNA targets.
Oulas A, Karathanasis N, Louloupi A, Pavlopoulos GA, Poirazi P, Kalantidis K, Iliopoulos I. Oulas A, et al. Methods Mol Biol. 2015;1269:207-29. doi: 10.1007/978-1-4939-2291-8_13. Methods Mol Biol. 2015. PMID: 25577381 Review.
Impaired clearance of apoptotic cells leads to HMGB1 release in the bone marrow of patients with myelodysplastic syndromes and induces TLR4-mediated cytokine production.
Velegraki M, Papakonstanti E, Mavroudi I, Psyllaki M, Tsatsanis C, Oulas A, Iliopoulos I, Katonis P, Papadaki HA. Velegraki M, et al. Among authors: oulas a. Haematologica. 2013 Aug;98(8):1206-15. doi: 10.3324/haematol.2012.064642. Epub 2013 Feb 12. Haematologica. 2013. PMID: 23403315 Free PMC article.
Unraveling genomic variation from next generation sequencing data.
Pavlopoulos GA, Oulas A, Iacucci E, Sifrim A, Moreau Y, Schneider R, Aerts J, Iliopoulos I. Pavlopoulos GA, et al. Among authors: oulas a. BioData Min. 2013 Jul 25;6(1):13. doi: 10.1186/1756-0381-6-13. BioData Min. 2013. PMID: 23885890 Free PMC article.
49 results