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Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation.
Nakayasu ES, Gritsenko M, Piehowski PD, Gao Y, Orton DJ, Schepmoes AA, Fillmore TL, Frohnert BI, Rewers M, Krischer JP, Ansong C, Suchy-Dicey AM, Evans-Molina C, Qian WJ, Webb-Robertson BM, Metz TO. Nakayasu ES, et al. Among authors: orton dj. Nat Protoc. 2021 Aug;16(8):3737-3760. doi: 10.1038/s41596-021-00566-6. Epub 2021 Jul 9. Nat Protoc. 2021. PMID: 34244696 Free PMC article. Review.
Application of the accurate mass and time tag approach in studies of the human blood lipidome.
Ding J, Sorensen CM, Jaitly N, Jiang H, Orton DJ, Monroe ME, Moore RJ, Smith RD, Metz TO. Ding J, et al. Among authors: orton dj. J Chromatogr B Analyt Technol Biomed Life Sci. 2008 Aug 15;871(2):243-52. doi: 10.1016/j.jchromb.2008.04.040. Epub 2008 May 7. J Chromatogr B Analyt Technol Biomed Life Sci. 2008. PMID: 18502191 Free PMC article.
Combined pulsed-Q dissociation and electron transfer dissociation for identification and quantification of iTRAQ-labeled phosphopeptides.
Yang F, Wu S, Stenoien DL, Zhao R, Monroe ME, Gritsenko MA, Purvine SO, Polpitiya AD, Tolić N, Zhang Q, Norbeck AD, Orton DJ, Moore RJ, Tang K, Anderson GA, Pasa-Tolić L, Camp DG 2nd, Smith RD. Yang F, et al. Among authors: orton dj. Anal Chem. 2009 May 15;81(10):4137-43. doi: 10.1021/ac802605m. Anal Chem. 2009. PMID: 19371082 Free PMC article.
The identification of novel potential injury mechanisms and candidate biomarkers in renal allograft rejection by quantitative proteomics.
Sigdel TK, Salomonis N, Nicora CD, Ryu S, He J, Dinh V, Orton DJ, Moore RJ, Hsieh SC, Dai H, Thien-Vu M, Xiao W, Smith RD, Qian WJ, Camp DG 2nd, Sarwal MM. Sigdel TK, et al. Among authors: orton dj. Mol Cell Proteomics. 2014 Feb;13(2):621-31. doi: 10.1074/mcp.M113.030577. Epub 2013 Dec 12. Mol Cell Proteomics. 2014. PMID: 24335474 Free PMC article.
Advancing the high throughput identification of liver fibrosis protein signatures using multiplexed ion mobility spectrometry.
Baker ES, Burnum-Johnson KE, Jacobs JM, Diamond DL, Brown RN, Ibrahim YM, Orton DJ, Piehowski PD, Purdy DE, Moore RJ, Danielson WF 3rd, Monroe ME, Crowell KL, Slysz GW, Gritsenko MA, Sandoval JD, Lamarche BL, Matzke MM, Webb-Robertson BJ, Simons BC, McMahon BJ, Bhattacharya R, Perkins JD, Carithers RL Jr, Strom S, Self SG, Katze MG, Anderson GA, Smith RD. Baker ES, et al. Among authors: orton dj. Mol Cell Proteomics. 2014 Apr;13(4):1119-27. doi: 10.1074/mcp.M113.034595. Epub 2014 Jan 8. Mol Cell Proteomics. 2014. PMID: 24403597 Free PMC article.
66 results