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Four principles to establish a universal virus taxonomy.
Simmonds P, Adriaenssens EM, Zerbini FM, Abrescia NGA, Aiewsakun P, Alfenas-Zerbini P, Bao Y, Barylski J, Drosten C, Duffy S, Duprex WP, Dutilh BE, Elena SF, García ML, Junglen S, Katzourakis A, Koonin EV, Krupovic M, Kuhn JH, Lambert AJ, Lefkowitz EJ, Łobocka M, Lood C, Mahony J, Meier-Kolthoff JP, Mushegian AR, Oksanen HM, Poranen MM, Reyes-Muñoz A, Robertson DL, Roux S, Rubino L, Sabanadzovic S, Siddell S, Skern T, Smith DB, Sullivan MB, Suzuki N, Turner D, Van Doorslaer K, Vandamme AM, Varsani A, Vasilakis N. Simmonds P, et al. Among authors: oksanen hm. PLoS Biol. 2023 Feb 13;21(2):e3001922. doi: 10.1371/journal.pbio.3001922. eCollection 2023 Feb. PLoS Biol. 2023. PMID: 36780432 Free PMC article.
Subcellular localization of bacteriophage PRD1 proteins in Escherichia coli.
Karttunen J, Mäntynen S, Ihalainen TO, Lehtivuori H, Tkachenko NV, Vihinen-Ranta M, Ihalainen JA, Bamford JK, Oksanen HM. Karttunen J, et al. Among authors: oksanen hm. Virus Res. 2014 Jan 22;179:44-52. doi: 10.1016/j.virusres.2013.11.015. Epub 2013 Nov 28. Virus Res. 2014. PMID: 24291253
The use of low-resolution phasing followed by phase extension from 7.6 to 2.5 Å resolution with noncrystallographic symmetry to solve the structure of a bacteriophage capsid protein.
Abrescia NG, Grimes JM, Oksanen HM, Bamford JK, Bamford DH, Stuart DI. Abrescia NG, et al. Among authors: oksanen hm. Acta Crystallogr D Biol Crystallogr. 2011 Mar;67(Pt 3):228-32. doi: 10.1107/S0907444911002277. Epub 2011 Feb 15. Acta Crystallogr D Biol Crystallogr. 2011. PMID: 21358054
Combined approaches to study virus structures.
Badia-Martinez D, Oksanen HM, Stuart DI, Abrescia NG. Badia-Martinez D, et al. Among authors: oksanen hm. Subcell Biochem. 2013;68:203-46. doi: 10.1007/978-94-007-6552-8_7. Subcell Biochem. 2013. PMID: 23737053 Review.
Mechanism of membranous tunnelling nanotube formation in viral genome delivery.
Peralta B, Gil-Carton D, Castaño-Díez D, Bertin A, Boulogne C, Oksanen HM, Bamford DH, Abrescia NG. Peralta B, et al. Among authors: oksanen hm. PLoS Biol. 2013 Sep;11(9):e1001667. doi: 10.1371/journal.pbio.1001667. Epub 2013 Sep 24. PLoS Biol. 2013. PMID: 24086111 Free PMC article.
Membrane-assisted viral DNA ejection.
Santos-Pérez I, Oksanen HM, Bamford DH, Goñi FM, Reguera D, Abrescia NGA. Santos-Pérez I, et al. Among authors: oksanen hm. Biochim Biophys Acta Gen Subj. 2017 Mar;1861(3):664-672. doi: 10.1016/j.bbagen.2016.12.013. Epub 2016 Dec 16. Biochim Biophys Acta Gen Subj. 2017. PMID: 27993658 Free article.
Taxonomy of prokaryotic viruses: 2016 update from the ICTV bacterial and archaeal viruses subcommittee.
Adriaenssens EM, Krupovic M, Knezevic P, Ackermann HW, Barylski J, Brister JR, Clokie MR, Duffy S, Dutilh BE, Edwards RA, Enault F, Jang HB, Klumpp J, Kropinski AM, Lavigne R, Poranen MM, Prangishvili D, Rumnieks J, Sullivan MB, Wittmann J, Oksanen HM, Gillis A, Kuhn JH. Adriaenssens EM, et al. Among authors: oksanen hm. Arch Virol. 2017 Apr;162(4):1153-1157. doi: 10.1007/s00705-016-3173-4. Epub 2016 Dec 31. Arch Virol. 2017. PMID: 28040838 No abstract available.
Taxonomy of prokaryotic viruses: 2017 update from the ICTV Bacterial and Archaeal Viruses Subcommittee.
Adriaenssens EM, Wittmann J, Kuhn JH, Turner D, Sullivan MB, Dutilh BE, Jang HB, van Zyl LJ, Klumpp J, Lobocka M, Moreno Switt AI, Rumnieks J, Edwards RA, Uchiyama J, Alfenas-Zerbini P, Petty NK, Kropinski AM, Barylski J, Gillis A, Clokie MRC, Prangishvili D, Lavigne R, Aziz RK, Duffy S, Krupovic M, Poranen MM, Knezevic P, Enault F, Tong Y, Oksanen HM, Rodney Brister J. Adriaenssens EM, et al. Among authors: oksanen hm. Arch Virol. 2018 Apr;163(4):1125-1129. doi: 10.1007/s00705-018-3723-z. Epub 2018 Jan 22. Arch Virol. 2018. PMID: 29356990 Free article. No abstract available.
85 results