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Evolutionary trends in host physiology outweigh dietary niche in structuring primate gut microbiomes.
Amato KR, G Sanders J, Song SJ, Nute M, Metcalf JL, Thompson LR, Morton JT, Amir A, J McKenzie V, Humphrey G, Gogul G, Gaffney J, L Baden A, A O Britton G, P Cuozzo F, Di Fiore A, J Dominy N, L Goldberg T, Gomez A, Kowalewski MM, J Lewis R, Link A, L Sauther M, Tecot S, A White B, E Nelson K, M Stumpf R, Knight R, R Leigh S. Amato KR, et al. Among authors: nute m, m stumpf r. ISME J. 2019 Mar;13(3):576-587. doi: 10.1038/s41396-018-0175-0. Epub 2018 Jul 11. ISME J. 2019. PMID: 29995839 Free PMC article.
Alterations to the gut microbiome after sport-related concussion in a collegiate football players cohort: A pilot study.
Soriano S, Curry K, Sadrameli SS, Wang Q, Nute M, Reeves E, Kabir R, Wiese J, Criswell A, Schodrof S, Britz GW, Gadhia R, Podell K, Treangen T, Villapol S. Soriano S, et al. Among authors: nute m. Brain Behav Immun Health. 2022 Mar 1;21:100438. doi: 10.1016/j.bbih.2022.100438. eCollection 2022 May. Brain Behav Immun Health. 2022. PMID: 35284846 Free PMC article.
Current progress and open challenges for applying deep learning across the biosciences.
Sapoval N, Aghazadeh A, Nute MG, Antunes DA, Balaji A, Baraniuk R, Barberan CJ, Dannenfelser R, Dun C, Edrisi M, Elworth RAL, Kille B, Kyrillidis A, Nakhleh L, Wolfe CR, Yan Z, Yao V, Treangen TJ. Sapoval N, et al. Among authors: nute mg. Nat Commun. 2022 Apr 1;13(1):1728. doi: 10.1038/s41467-022-29268-7. Nat Commun. 2022. PMID: 35365602 Free PMC article. Review.
KOMB: K-core based de novo characterization of copy number variation in microbiomes.
Balaji A, Sapoval N, Seto C, Leo Elworth RA, Fu Y, Nute MG, Savidge T, Segarra S, Treangen TJ. Balaji A, et al. Among authors: nute mg. Comput Struct Biotechnol J. 2022 Jun 17;20:3208-3222. doi: 10.1016/j.csbj.2022.06.019. eCollection 2022. Comput Struct Biotechnol J. 2022. PMID: 35832621 Free PMC article.
41 results