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Genotype-by-environment interactions and local adaptation shape selection in the US National Chip Processing Trial.
Agha HI, Endelman JB, Chitwood-Brown J, Clough M, Coombs J, De Jong WS, Douches DS, Higgins CR, Holm DG, Novy R, Resende MFR, Sathuvalli V, Thompson AL, Yencho GC, Zotarelli L, Shannon LM. Agha HI, et al. Among authors: novy r. Theor Appl Genet. 2024 Apr 10;137(5):99. doi: 10.1007/s00122-024-04610-3. Theor Appl Genet. 2024. PMID: 38598016 Free PMC article.
Automated tetraploid genotype calling by hierarchical clustering.
Schmitz Carley CA, Coombs JJ, Douches DS, Bethke PC, Palta JP, Novy RG, Endelman JB. Schmitz Carley CA, et al. Theor Appl Genet. 2017 Apr;130(4):717-726. doi: 10.1007/s00122-016-2845-5. Epub 2017 Jan 9. Theor Appl Genet. 2017. PMID: 28070610
Genetic Variance Partitioning and Genome-Wide Prediction with Allele Dosage Information in Autotetraploid Potato.
Endelman JB, Carley CAS, Bethke PC, Coombs JJ, Clough ME, da Silva WL, De Jong WS, Douches DS, Frederick CM, Haynes KG, Holm DG, Miller JC, Muñoz PR, Navarro FM, Novy RG, Palta JP, Porter GA, Rak KT, Sathuvalli VR, Thompson AL, Yencho GC. Endelman JB, et al. Among authors: novy rg. Genetics. 2018 May;209(1):77-87. doi: 10.1534/genetics.118.300685. Epub 2018 Mar 7. Genetics. 2018. PMID: 29514860 Free PMC article.
Phased, chromosome-scale genome assemblies of tetraploid potato reveal a complex genome, transcriptome, and predicted proteome landscape underpinning genetic diversity.
Hoopes G, Meng X, Hamilton JP, Achakkagari SR, de Alves Freitas Guesdes F, Bolger ME, Coombs JJ, Esselink D, Kaiser NR, Kodde L, Kyriakidou M, Lavrijssen B, van Lieshout N, Shereda R, Tuttle HK, Vaillancourt B, Wood JC, de Boer JM, Bornowski N, Bourke P, Douches D, van Eck HJ, Ellis D, Feldman MJ, Gardner KM, Hopman JCP, Jiang J, De Jong WS, Kuhl JC, Novy RG, Oome S, Sathuvalli V, Tan EH, Ursum RA, Vales MI, Vining K, Visser RGF, Vossen J, Yencho GC, Anglin NL, Bachem CWB, Endelman JB, Shannon LM, Strömvik MV, Tai HH, Usadel B, Buell CR, Finkers R. Hoopes G, et al. Among authors: novy rg. Mol Plant. 2022 Mar 7;15(3):520-536. doi: 10.1016/j.molp.2022.01.003. Epub 2022 Jan 10. Mol Plant. 2022. PMID: 35026436 Free article.
Identification of QTL associated with plant vine characteristics and infection response to late blight, early blight, and Verticillium wilt in a tetraploid potato population derived from late blight-resistant Palisade Russet.
Park J, Sathuvalli V, Yilma S, Whitworth J, Novy RG. Park J, et al. Among authors: novy rg. Front Plant Sci. 2023 Oct 11;14:1222596. doi: 10.3389/fpls.2023.1222596. eCollection 2023. Front Plant Sci. 2023. PMID: 37900754 Free PMC article.
Current Status of Potato Cyst Nematodes in North America.
Dandurand LM, Zasada IA, Wang X, Mimee B, De Jong W, Novy R, Whitworth J, Kuhl JC. Dandurand LM, et al. Among authors: novy r. Annu Rev Phytopathol. 2019 Aug 25;57:117-133. doi: 10.1146/annurev-phyto-082718-100254. Epub 2019 May 17. Annu Rev Phytopathol. 2019. PMID: 31100997 Review.
42 results