Niewieczerzał S - Search Results

1

GS-SMD server for steered molecular dynamics of peptide substrates in the active site of the γ-secretase complex.

Orzeł U, Pasznik P, Miszta P, Lorkowski M, Niewieczerzał S, Jakowiecki J, Filipek S. Orzeł U, et al. Among authors: niewieczerzal s. Nucleic Acids Res. 2023 Jul 5;51(W1):W251-W262. doi: 10.1093/nar/gkad409. Nucleic Acids Res. 2023. PMID: 37207343 Free PMC article.

2

GPCRsignal: webserver for analysis of the interface between G-protein-coupled receptors and their effector proteins by dynamics and mutations.

Miszta P, Pasznik P, Niewieczerzał S, Jakowiecki J, Filipek S. Miszta P, et al. Among authors: niewieczerzal s. Nucleic Acids Res. 2021 Jul 2;49(W1):W247-W256. doi: 10.1093/nar/gkab434. Nucleic Acids Res. 2021. PMID: 34060630 Free PMC article.

3

Homology Modeling Using GPCRM Web Service.

Miszta P, Niewieczerzał S, Pasznik P, Filipek S. Miszta P, et al. Among authors: niewieczerzal s. Methods Mol Biol. 2021;2268:305-321. doi: 10.1007/978-1-0716-1221-7_20. Methods Mol Biol. 2021. PMID: 34085277

4

COGRIMEN: Coarse-Grained Method for Modeling of Membrane Proteins in Implicit Environments.

Miszta P, Pasznik P, Niewieczerzał S, Młynarczyk K, Filipek S. Miszta P, et al. Among authors: niewieczerzal s. J Chem Theory Comput. 2022 Sep 13;18(9):5145-5156. doi: 10.1021/acs.jctc.2c00140. Epub 2022 Aug 23. J Chem Theory Comput. 2022. PMID: 35998323 Free PMC article.

5

Potential off-target effects of beta-blockers on gut hormone receptors: In silico study including GUT-DOCK-A web service for small-molecule docking.

Pasznik P, Rutkowska E, Niewieczerzal S, Cielecka-Piontek J, Latek D. Pasznik P, et al. Among authors: niewieczerzal s. PLoS One. 2019 Jan 25;14(1):e0210705. doi: 10.1371/journal.pone.0210705. eCollection 2019. PLoS One. 2019. PMID: 30682072 Free PMC article.

6

Pharmacophore guided discovery of small-molecule interleukin 15 inhibitors.

Żyżyńska-Granica B, Trzaskowski B, Niewieczerzał S, Filipek S, Zegrocka-Stendel O, Dutkiewicz M, Krzeczyński P, Kowalewska M, Koziak K. Żyżyńska-Granica B, et al. Among authors: niewieczerzal s. Eur J Med Chem. 2017 Aug 18;136:543-547. doi: 10.1016/j.ejmech.2017.05.034. Epub 2017 May 12. Eur J Med Chem. 2017. PMID: 28535470

7

KnotGenome: a server to analyze entanglements of chromosomes.

Sulkowska JI, Niewieczerzal S, Jarmolinska AI, Siebert JT, Virnau P, Niemyska W. Sulkowska JI, et al. Among authors: niewieczerzal s. Nucleic Acids Res. 2018 Jul 2;46(W1):W17-W24. doi: 10.1093/nar/gky511. Nucleic Acids Res. 2018. PMID: 29905836 Free PMC article.

8

Protein Knotting by Active Threading of Nascent Polypeptide Chain Exiting from the Ribosome Exit Channel.

Dabrowski-Tumanski P, Piejko M, Niewieczerzal S, Stasiak A, Sulkowska JI. Dabrowski-Tumanski P, et al. Among authors: niewieczerzal s. J Phys Chem B. 2018 Dec 13;122(49):11616-11625. doi: 10.1021/acs.jpcb.8b07634. Epub 2018 Oct 12. J Phys Chem B. 2018. PMID: 30198720

9

The exclusive effects of chaperonin on the behavior of proteins with 52 knot.

Zhao Y, Dabrowski-Tumanski P, Niewieczerzal S, Sulkowska JI. Zhao Y, et al. Among authors: niewieczerzal s. PLoS Comput Biol. 2018 Mar 16;14(3):e1005970. doi: 10.1371/journal.pcbi.1005970. eCollection 2018 Mar. PLoS Comput Biol. 2018. PMID: 29547629 Free PMC article.

10

Drug-induced diabetes type 2: In silico study involving class B GPCRs.

Latek D, Rutkowska E, Niewieczerzal S, Cielecka-Piontek J. Latek D, et al. Among authors: niewieczerzal s. PLoS One. 2019 Jan 16;14(1):e0208892. doi: 10.1371/journal.pone.0208892. eCollection 2019. PLoS One. 2019. PMID: 30650080 Free PMC article.

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