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Ten quick tips for building FAIR workflows.
de Visser C, Johansson LF, Kulkarni P, Mei H, Neerincx P, Joeri van der Velde K, Horvatovich P, van Gool AJ, Swertz MA, Hoen PAC', Niehues A. de Visser C, et al. Among authors: niehues a. PLoS Comput Biol. 2023 Sep 28;19(9):e1011369. doi: 10.1371/journal.pcbi.1011369. eCollection 2023 Sep. PLoS Comput Biol. 2023. PMID: 37768885 Free PMC article.
A multi-omics data analysis workflow packaged as a FAIR Digital Object.
Niehues A, de Visser C, Hagenbeek FA, Kulkarni P, Pool R, Karu N, Kindt ASD, Singh G, Vermeiren RRJM, Boomsma DI, van Dongen J, 't Hoen PAC, van Gool AJ. Niehues A, et al. Gigascience. 2024 Jan 2;13:giad115. doi: 10.1093/gigascience/giad115. Gigascience. 2024. PMID: 38217405 Free PMC article.
Computational approaches for network-based integrative multi-omics analysis.
Agamah FE, Bayjanov JR, Niehues A, Njoku KF, Skelton M, Mazandu GK, Ederveen THA, Mulder N, Chimusa ER, 't Hoen PAC. Agamah FE, et al. Among authors: niehues a. Front Mol Biosci. 2022 Nov 14;9:967205. doi: 10.3389/fmolb.2022.967205. eCollection 2022. Front Mol Biosci. 2022. PMID: 36452456 Free PMC article. Review.
Tackling the translational challenges of multi-omics research in the realm of European personalised medicine: A workshop report.
Oldoni E, Saunders G, Bietrix F, Garcia Bermejo ML, Niehues A, 't Hoen PAC, Nordlund J, Hajduch M, Scherer A, Kivinen K, Pitkänen E, Mäkela TP, Gut I, Scollen S, Kozera Ł, Esteller M, Shi L, Ussi A, Andreu AL, van Gool AJ. Oldoni E, et al. Among authors: niehues a. Front Mol Biosci. 2022 Oct 13;9:974799. doi: 10.3389/fmolb.2022.974799. eCollection 2022. Front Mol Biosci. 2022. PMID: 36310597 Free PMC article.
Improving CT accuracy in the diagnosis of COVID-19 in a hospital setting.
Erxleben C, Adams LC, Albrecht J, Petersen A, Vahldiek JL, Thieß HM, Kremmin J, Makowski MR, Niehues A, Niehues SM, Bressem KK. Erxleben C, et al. Among authors: niehues a. Clin Imaging. 2021 Aug;76:1-5. doi: 10.1016/j.clinimag.2021.01.026. Epub 2021 Jan 30. Clin Imaging. 2021. PMID: 33545516 Free PMC article.
Is lung density associated with severity of COVID-19?
Bressem KK, Adams LC, Albrecht J, Petersen A, Thieß HM, Niehues A, Niehues SM, Vahldiek JL. Bressem KK, et al. Among authors: niehues a. Pol J Radiol. 2020 Oct 30;85:e600-e606. doi: 10.5114/pjr.2020.100788. eCollection 2020. Pol J Radiol. 2020. PMID: 33204375 Free PMC article.
A seven-membered cell wall related transglycosylase gene family in Aspergillus niger is relevant for cell wall integrity in cell wall mutants with reduced α-glucan or galactomannan.
van Leeuwe TM, Wattjes J, Niehues A, Forn-Cuní G, Geoffrion N, Mélida H, Arentshorst M, Molina A, Tsang A, Meijer AH, Moerschbacher BM, Punt PJ, Ram AFJ. van Leeuwe TM, et al. Among authors: niehues a. Cell Surf. 2020 Mar 21;6:100039. doi: 10.1016/j.tcsw.2020.100039. eCollection 2020 Dec. Cell Surf. 2020. PMID: 32743151 Free PMC article.
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