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MPLEx: a Robust and Universal Protocol for Single-Sample Integrative Proteomic, Metabolomic, and Lipidomic Analyses.
Nakayasu ES, Nicora CD, Sims AC, Burnum-Johnson KE, Kim YM, Kyle JE, Matzke MM, Shukla AK, Chu RK, Schepmoes AA, Jacobs JM, Baric RS, Webb-Robertson BJ, Smith RD, Metz TO. Nakayasu ES, et al. Among authors: nicora cd. mSystems. 2016 May 10;1(3):e00043-16. doi: 10.1128/mSystems.00043-16. eCollection 2016 May-Jun. mSystems. 2016. PMID: 27822525 Free PMC article.
MPLEx: a method for simultaneous pathogen inactivation and extraction of samples for multi-omics profiling.
Burnum-Johnson KE, Kyle JE, Eisfeld AJ, Casey CP, Stratton KG, Gonzalez JF, Habyarimana F, Negretti NM, Sims AC, Chauhan S, Thackray LB, Halfmann PJ, Walters KB, Kim YM, Zink EM, Nicora CD, Weitz KK, Webb-Robertson BM, Nakayasu ES, Ahmer B, Konkel ME, Motin V, Baric RS, Diamond MS, Kawaoka Y, Waters KM, Smith RD, Metz TO. Burnum-Johnson KE, et al. Among authors: nicora cd. Analyst. 2017 Jan 26;142(3):442-448. doi: 10.1039/c6an02486f. Analyst. 2017. PMID: 28091625 Free PMC article.
The MPLEx Protocol for Multi-omic Analyses of Soil Samples.
Nicora CD, Burnum-Johnson KE, Nakayasu ES, Casey CP, White RA 3rd, Roy Chowdhury T, Kyle JE, Kim YM, Smith RD, Metz TO, Jansson JK, Baker ES. Nicora CD, et al. J Vis Exp. 2018 May 30;(135):57343. doi: 10.3791/57343. J Vis Exp. 2018. PMID: 29912205 Free PMC article.
Rare Earth Elements Alter Redox Balance in Methylomicrobium alcaliphilum 20ZR.
Akberdin IR, Collins DA, Hamilton R, Oshchepkov DY, Shukla AK, Nicora CD, Nakayasu ES, Adkins JN, Kalyuzhnaya MG. Akberdin IR, et al. Among authors: nicora cd. Front Microbiol. 2018 Nov 27;9:2735. doi: 10.3389/fmicb.2018.02735. eCollection 2018. Front Microbiol. 2018. PMID: 30542328 Free PMC article.
Colonies of the fungus Aspergillus niger are highly differentiated to adapt to local carbon source variation.
Daly P, Peng M, Mitchell HD, Kim YM, Ansong C, Brewer H, de Gijsel P, Lipton MS, Markillie LM, Nicora CD, Orr G, Wiebenga A, Hildén KS, Kabel MA, Baker SE, Mäkelä MR, de Vries RP. Daly P, et al. Among authors: nicora cd. Environ Microbiol. 2020 Mar;22(3):1154-1166. doi: 10.1111/1462-2920.14907. Epub 2020 Jan 6. Environ Microbiol. 2020. PMID: 31876091 Free PMC article.
152 results