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MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins.
Piovesan D, Tabaro F, Paladin L, Necci M, Micetic I, Camilloni C, Davey N, Dosztányi Z, Mészáros B, Monzon AM, Parisi G, Schad E, Sormanni P, Tompa P, Vendruscolo M, Vranken WF, Tosatto SCE. Piovesan D, et al. Among authors: necci m. Nucleic Acids Res. 2018 Jan 4;46(D1):D471-D476. doi: 10.1093/nar/gkx1071. Nucleic Acids Res. 2018. PMID: 29136219 Free PMC article.
InterPro in 2019: improving coverage, classification and access to protein sequence annotations.
Mitchell AL, Attwood TK, Babbitt PC, Blum M, Bork P, Bridge A, Brown SD, Chang HY, El-Gebali S, Fraser MI, Gough J, Haft DR, Huang H, Letunic I, Lopez R, Luciani A, Madeira F, Marchler-Bauer A, Mi H, Natale DA, Necci M, Nuka G, Orengo C, Pandurangan AP, Paysan-Lafosse T, Pesseat S, Potter SC, Qureshi MA, Rawlings ND, Redaschi N, Richardson LJ, Rivoire C, Salazar GA, Sangrador-Vegas A, Sigrist CJA, Sillitoe I, Sutton GG, Thanki N, Thomas PD, Tosatto SCE, Yong SY, Finn RD. Mitchell AL, et al. Among authors: necci m. Nucleic Acids Res. 2019 Jan 8;47(D1):D351-D360. doi: 10.1093/nar/gky1100. Nucleic Acids Res. 2019. PMID: 30398656 Free PMC article.
PlaToLoCo: the first web meta-server for visualization and annotation of low complexity regions in proteins.
Jarnot P, Ziemska-Legiecka J, Dobson L, Merski M, Mier P, Andrade-Navarro MA, Hancock JM, Dosztányi Z, Paladin L, Necci M, Piovesan D, Tosatto SCE, Promponas VJ, Grynberg M, Gruca A. Jarnot P, et al. Among authors: necci m. Nucleic Acids Res. 2020 Jul 2;48(W1):W77-W84. doi: 10.1093/nar/gkaa339. Nucleic Acids Res. 2020. PMID: 32421769 Free PMC article.
Exploring Protein Intrinsic Disorder with MobiDB.
Monzon AM, Hatos A, Necci M, Piovesan D, Tosatto SCE. Monzon AM, et al. Among authors: necci m. Methods Mol Biol. 2020;2141:127-143. doi: 10.1007/978-1-0716-0524-0_6. Methods Mol Biol. 2020. PMID: 32696355
RepeatsDB in 2021: improved data and extended classification for protein tandem repeat structures.
Paladin L, Bevilacqua M, Errigo S, Piovesan D, Mičetić I, Necci M, Monzon AM, Fabre ML, Lopez JL, Nilsson JF, Rios J, Menna PL, Cabrera M, Buitron MG, Kulik MG, Fernandez-Alberti S, Fornasari MS, Parisi G, Lagares A, Hirsh L, Andrade-Navarro MA, Kajava AV, Tosatto SCE. Paladin L, et al. Among authors: necci m. Nucleic Acids Res. 2021 Jan 8;49(D1):D452-D457. doi: 10.1093/nar/gkaa1097. Nucleic Acids Res. 2021. PMID: 33237313 Free PMC article.
23 results