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Tutorial: best practices and considerations for mass-spectrometry-based protein biomarker discovery and validation.
Nakayasu ES, Gritsenko M, Piehowski PD, Gao Y, Orton DJ, Schepmoes AA, Fillmore TL, Frohnert BI, Rewers M, Krischer JP, Ansong C, Suchy-Dicey AM, Evans-Molina C, Qian WJ, Webb-Robertson BM, Metz TO. Nakayasu ES, et al. Nat Protoc. 2021 Aug;16(8):3737-3760. doi: 10.1038/s41596-021-00566-6. Epub 2021 Jul 9. Nat Protoc. 2021. PMID: 34244696 Free PMC article. Review.
Top-down proteomics reveals a unique protein S-thiolation switch in Salmonella Typhimurium in response to infection-like conditions.
Ansong C, Wu S, Meng D, Liu X, Brewer HM, Deatherage Kaiser BL, Nakayasu ES, Cort JR, Pevzner P, Smith RD, Heffron F, Adkins JN, Pasa-Tolic L. Ansong C, et al. Among authors: nakayasu es. Proc Natl Acad Sci U S A. 2013 Jun 18;110(25):10153-8. doi: 10.1073/pnas.1221210110. Epub 2013 May 29. Proc Natl Acad Sci U S A. 2013. PMID: 23720318 Free PMC article.
A method to determine lysine acetylation stoichiometries.
Nakayasu ES, Wu S, Sydor MA, Shukla AK, Weitz KK, Moore RJ, Hixson KK, Kim JS, Petyuk VA, Monroe ME, Pasa-Tolic L, Qian WJ, Smith RD, Adkins JN, Ansong C. Nakayasu ES, et al. Int J Proteomics. 2014;2014:730725. doi: 10.1155/2014/730725. Epub 2014 Jul 20. Int J Proteomics. 2014. PMID: 25143833 Free PMC article.
Identification of Salmonella Typhimurium Deubiquitinase SseL Substrates by Immunoaffinity Enrichment and Quantitative Proteomic Analysis.
Nakayasu ES, Sydor MA, Brown RN, Sontag RL, Sobreira TJ, Slysz GW, Humphrys DR, Skarina T, Onoprienko O, Di Leo R, Deatherage Kaiser BL, Li J, Ansong C, Cambronne ED, Smith RD, Savchenko A, Adkins JN. Nakayasu ES, et al. J Proteome Res. 2015 Sep 4;14(9):4029-38. doi: 10.1021/acs.jproteome.5b00574. Epub 2015 Aug 6. J Proteome Res. 2015. PMID: 26147956 Free PMC article.
148 results