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PHi-C: deciphering Hi-C data into polymer dynamics.
Shinkai S, Nakagawa M, Sugawara T, Togashi Y, Ochiai H, Nakato R, Taniguchi Y, Onami S. Shinkai S, et al. Among authors: nakato r. NAR Genom Bioinform. 2020 Mar 31;2(2):lqaa020. doi: 10.1093/nargab/lqaa020. eCollection 2020 Jun. NAR Genom Bioinform. 2020. PMID: 33575580 Free PMC article.
Toward understanding the dynamic state of 3D genome.
Shinkai S, Onami S, Nakato R. Shinkai S, et al. Among authors: nakato r. Comput Struct Biotechnol J. 2020 Aug 21;18:2259-2269. doi: 10.1016/j.csbj.2020.08.014. eCollection 2020. Comput Struct Biotechnol J. 2020. PMID: 32952939 Free PMC article. Review.
Highly rigid H3.1/H3.2-H3K9me3 domains set a barrier for cell fate reprogramming in trophoblast stem cells.
Hada M, Miura H, Tanigawa A, Matoba S, Inoue K, Ogonuki N, Hirose M, Watanabe N, Nakato R, Fujiki K, Hasegawa A, Sakashita A, Okae H, Miura K, Shikata D, Arima T, Shirahige K, Hiratani I, Ogura A. Hada M, et al. Among authors: nakato r. Genes Dev. 2022 Jan 1;36(1-2):84-102. doi: 10.1101/gad.348782.121. Epub 2022 Jan 6. Genes Dev. 2022. PMID: 34992147 Free PMC article.
91 results