Naeem H - Search Results

1

Gestational diabetes and maternal obesity are associated with epigenome-wide methylation changes in children.

Hjort L, Martino D, Grunnet LG, Naeem H, Maksimovic J, Olsson AH, Zhang C, Ling C, Olsen SF, Saffery R, Vaag AA. Hjort L, et al. Among authors: naeem h. JCI Insight. 2018 Sep 6;3(17):e122572. doi: 10.1172/jci.insight.122572. eCollection 2018 Sep 6. JCI Insight. 2018. PMID: 30185669 Free PMC article.

2

Genome-Wide Measures of Peripheral Blood Dna Methylation and Prostate Cancer Risk in a Prospective Nested Case-Control Study.

FitzGerald LM, Naeem H, Makalic E, Schmidt DF, Dowty JG, Joo JE, Jung CH, Bassett JK, Dugue PA, Chung J, Lonie A, Milne RL, Wong EM, Hopper JL, English DR, Severi G, Baglietto L, Pedersen J, Giles GG, Southey MC. FitzGerald LM, et al. Among authors: naeem h. Prostate. 2017 Apr;77(5):471-478. doi: 10.1002/pros.23289. Epub 2017 Jan 24. Prostate. 2017. PMID: 28116812

3

Reducing the risk of false discovery enabling identification of biologically significant genome-wide methylation status using the HumanMethylation450 array.

Naeem H, Wong NC, Chatterton Z, Hong MK, Pedersen JS, Corcoran NM, Hovens CM, Macintyre G. Naeem H, et al. BMC Genomics. 2014 Jan 22;15(1):51. doi: 10.1186/1471-2164-15-51. BMC Genomics. 2014. PMID: 24447442 Free PMC article.

4

A urinary microRNA signature can predict the presence of bladder urothelial carcinoma in patients undergoing surveillance.

Sapre N, Macintyre G, Clarkson M, Naeem H, Cmero M, Kowalczyk A, Anderson PD, Costello AJ, Corcoran NM, Hovens CM. Sapre N, et al. Among authors: naeem h. Br J Cancer. 2016 Feb 16;114(4):454-62. doi: 10.1038/bjc.2015.472. Epub 2016 Jan 26. Br J Cancer. 2016. PMID: 26812572 Free PMC article.

5

MIRTFnet: analysis of miRNA regulated transcription factors.

Naeem H, Küffner R, Zimmer R. Naeem H, et al. PLoS One. 2011;6(8):e22519. doi: 10.1371/journal.pone.0022519. Epub 2011 Aug 17. PLoS One. 2011. PMID: 21857930 Free PMC article.

6

Tracking the origins and drivers of subclonal metastatic expansion in prostate cancer.

Hong MK, Macintyre G, Wedge DC, Van Loo P, Patel K, Lunke S, Alexandrov LB, Sloggett C, Cmero M, Marass F, Tsui D, Mangiola S, Lonie A, Naeem H, Sapre N, Phal PM, Kurganovs N, Chin X, Kerger M, Warren AY, Neal D, Gnanapragasam V, Rosenfeld N, Pedersen JS, Ryan A, Haviv I, Costello AJ, Corcoran NM, Hovens CM. Hong MK, et al. Among authors: naeem h. Nat Commun. 2015 Apr 1;6:6605. doi: 10.1038/ncomms7605. Nat Commun. 2015. PMID: 25827447 Free PMC article.

7

The NF-κB transcription factor RelA is required for the tolerogenic function of Foxp3(+) regulatory T cells.

Messina N, Fulford T, O'Reilly L, Loh WX, Motyer JM, Ellis D, McLean C, Naeem H, Lin A, Gugasyan R, Slattery RM, Grumont RJ, Gerondakis S. Messina N, et al. Among authors: naeem h. J Autoimmun. 2016 Jun;70:52-62. doi: 10.1016/j.jaut.2016.03.017. Epub 2016 Apr 7. J Autoimmun. 2016. PMID: 27068879

8

miRSel: automated extraction of associations between microRNAs and genes from the biomedical literature.

Naeem H, Küffner R, Csaba G, Zimmer R. Naeem H, et al. BMC Bioinformatics. 2010 Mar 16;11:135. doi: 10.1186/1471-2105-11-135. BMC Bioinformatics. 2010. PMID: 20233441 Free PMC article.

9

Rigorous assessment of gene set enrichment tests.

Naeem H, Zimmer R, Tavakkolkhah P, Küffner R. Naeem H, et al. Bioinformatics. 2012 Jun 1;28(11):1480-6. doi: 10.1093/bioinformatics/bts164. Epub 2012 Apr 5. Bioinformatics. 2012. PMID: 22492315

10

The Use of Targeted Next Generation Sequencing to Explore Candidate Regulators of TGF-β1's Impact on Kidney Cells.

Wang B, Ji G, Naeem H, Wang J, Kantharidis P, Powell D, Ricardo SD. Wang B, et al. Among authors: naeem h. Front Physiol. 2018 Dec 10;9:1755. doi: 10.3389/fphys.2018.01755. eCollection 2018. Front Physiol. 2018. PMID: 30618784 Free PMC article.

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