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Probing binding hot spots at protein-RNA recognition sites.
Barik A, Nithin C, Karampudi NB, Mukherjee S, Bahadur RP. Barik A, et al. Among authors: mukherjee s. Nucleic Acids Res. 2016 Jan 29;44(2):e9. doi: 10.1093/nar/gkv876. Epub 2015 Sep 13. Nucleic Acids Res. 2016. PMID: 26365245 Free PMC article.
Constrained peptides mimic a viral suppressor of RNA silencing.
Kuepper A, McLoughlin NM, Neubacher S, Yeste-Vázquez A, Collado Camps E, Nithin C, Mukherjee S, Bethge L, Bujnicki JM, Brock R, Heinrichs S, Grossmann TN. Kuepper A, et al. Among authors: mukherjee s. Nucleic Acids Res. 2021 Dec 16;49(22):12622-12633. doi: 10.1093/nar/gkab1149. Nucleic Acids Res. 2021. PMID: 34871435 Free PMC article.
Conserved structures and dynamics in 5'-proximal regions of Betacoronavirus RNA genomes.
de Moura TR, Purta E, Bernat A, Martín-Cuevas EM, Kurkowska M, Baulin EF, Mukherjee S, Nowak J, Biela AP, Rawski M, Glatt S, Moreno-Herrero F, Bujnicki JM. de Moura TR, et al. Among authors: mukherjee s. Nucleic Acids Res. 2024 Apr 12;52(6):3419-3432. doi: 10.1093/nar/gkae144. Nucleic Acids Res. 2024. PMID: 38426934 Free PMC article.
MODOMICS: a database of RNA modification pathways. 2021 update.
Boccaletto P, Stefaniak F, Ray A, Cappannini A, Mukherjee S, Purta E, Kurkowska M, Shirvanizadeh N, Destefanis E, Groza P, Avşar G, Romitelli A, Pir P, Dassi E, Conticello SG, Aguilo F, Bujnicki JM. Boccaletto P, et al. Among authors: mukherjee s. Nucleic Acids Res. 2022 Jan 7;50(D1):D231-D235. doi: 10.1093/nar/gkab1083. Nucleic Acids Res. 2022. PMID: 34893873 Free PMC article.
NACDDB: Nucleic Acid Circular Dichroism Database.
Cappannini A, Mosca K, Mukherjee S, Moafinejad SN, Sinden RR, Arluison V, Bujnicki J, Wien F. Cappannini A, et al. Among authors: mukherjee s. Nucleic Acids Res. 2023 Jan 6;51(D1):D226-D231. doi: 10.1093/nar/gkac829. Nucleic Acids Res. 2023. PMID: 36280237 Free PMC article.
MODOMICS: a database of RNA modifications and related information. 2023 update.
Cappannini A, Ray A, Purta E, Mukherjee S, Boccaletto P, Moafinejad SN, Lechner A, Barchet C, Klaholz BP, Stefaniak F, Bujnicki JM. Cappannini A, et al. Among authors: mukherjee s. Nucleic Acids Res. 2024 Jan 5;52(D1):D239-D244. doi: 10.1093/nar/gkad1083. Nucleic Acids Res. 2024. PMID: 38015436 Free PMC article.
6,594 results