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RNA helicase-dependent gene looping impacts messenger RNA processing.
Terrone S, Valat J, Fontrodona N, Giraud G, Claude JB, Combe E, Lapendry A, Polvèche H, Ameur LB, Duvermy A, Modolo L, Bernard P, Mortreux F, Auboeuf D, Bourgeois CF. Terrone S, et al. Among authors: modolo l. Nucleic Acids Res. 2022 Sep 9;50(16):9226-9246. doi: 10.1093/nar/gkac717. Nucleic Acids Res. 2022. PMID: 36039747 Free PMC article.
Interplay between coding and exonic splicing regulatory sequences.
Fontrodona N, Aubé F, Claude JB, Polvèche H, Lemaire S, Tranchevent LC, Modolo L, Mortreux F, Bourgeois CF, Auboeuf D. Fontrodona N, et al. Among authors: modolo l. Genome Res. 2019 May;29(5):711-722. doi: 10.1101/gr.241315.118. Epub 2019 Apr 8. Genome Res. 2019. PMID: 30962178 Free PMC article.
TEtools facilitates big data expression analysis of transposable elements and reveals an antagonism between their activity and that of piRNA genes.
Lerat E, Fablet M, Modolo L, Lopez-Maestre H, Vieira C. Lerat E, et al. Among authors: modolo l. Nucleic Acids Res. 2017 Feb 28;45(4):e17. doi: 10.1093/nar/gkw953. Nucleic Acids Res. 2017. PMID: 28204592 Free PMC article.
This tool takes into account the TE sequence diversity of the genome, it can be applied to unannotated or unassembled genomes and is freely available under the GPL3 (https://github.com/l-modolo/TEtools). TEtools performs the mapping of RNA-seq data obtained from cla …
This tool takes into account the TE sequence diversity of the genome, it can be applied to unannotated or unassembled genomes and is freely …
Evidence for close molecular proximity between reverting and undifferentiated cells.
Zreika S, Fourneaux C, Vallin E, Modolo L, Seraphin R, Moussy A, Ventre E, Bouvier M, Ozier-Lafontaine A, Bonnaffoux A, Picard F, Gandrillon O, Gonin-Giraud S. Zreika S, et al. Among authors: modolo l. BMC Biol. 2022 Jul 6;20(1):155. doi: 10.1186/s12915-022-01363-7. BMC Biol. 2022. PMID: 35794592 Free PMC article.
Males as somatic investment in a parthenogenetic nematode.
Grosmaire M, Launay C, Siegwald M, Brugière T, Estrada-Virrueta L, Berger D, Burny C, Modolo L, Blaxter M, Meister P, Félix MA, Gouyon PH, Delattre M. Grosmaire M, et al. Among authors: modolo l. Science. 2019 Mar 15;363(6432):1210-1213. doi: 10.1126/science.aau0099. Science. 2019. PMID: 30872523
Differentiation is accompanied by a progressive loss in transcriptional memory.
Fourneaux C, Racine L, Koering C, Dussurgey S, Vallin E, Moussy A, Parmentier R, Brunard F, Stockholm D, Modolo L, Picard F, Gandrillon O, Paldi A, Gonin-Giraud S. Fourneaux C, et al. Among authors: modolo l. BMC Biol. 2024 Mar 12;22(1):58. doi: 10.1186/s12915-024-01846-9. BMC Biol. 2024. PMID: 38468285 Free PMC article.
79 results