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The Ontologies Community of Practice: A CGIAR Initiative for Big Data in Agrifood Systems.
Arnaud E, Laporte MA, Kim S, Aubert C, Leonelli S, Miro B, Cooper L, Jaiswal P, Kruseman G, Shrestha R, Buttigieg PL, Mungall CJ, Pietragalla J, Agbona A, Muliro J, Detras J, Hualla V, Rathore A, Das RR, Dieng I, Bauchet G, Menda N, Pommier C, Shaw F, Lyon D, Mwanzia L, Juarez H, Bonaiuti E, Chiputwa B, Obileye O, Auzoux S, Yeumo ED, Mueller LA, Silverstein K, Lafargue A, Antezana E, Devare M, King B. Arnaud E, et al. Among authors: menda n. Patterns (N Y). 2020 Sep 25;1(7):100105. doi: 10.1016/j.patter.2020.100105. eCollection 2020 Oct 9. Patterns (N Y). 2020. PMID: 33205138 Free PMC article.
The SGN comparative map viewer.
Mueller LA, Mills AA, Skwarecki B, Buels RM, Menda N, Tanksley SD. Mueller LA, et al. Among authors: menda n. Bioinformatics. 2008 Feb 1;24(3):422-3. doi: 10.1093/bioinformatics/btm597. Epub 2008 Jan 17. Bioinformatics. 2008. PMID: 18202028
The Sol Genomics Network (solgenomics.net): growing tomatoes using Perl.
Bombarely A, Menda N, Tecle IY, Buels RM, Strickler S, Fischer-York T, Pujar A, Leto J, Gosselin J, Mueller LA. Bombarely A, et al. Among authors: menda n. Nucleic Acids Res. 2011 Jan;39(Database issue):D1149-55. doi: 10.1093/nar/gkq866. Epub 2010 Oct 8. Nucleic Acids Res. 2011. PMID: 20935049 Free PMC article.
The plant ontology as a tool for comparative plant anatomy and genomic analyses.
Cooper L, Walls RL, Elser J, Gandolfo MA, Stevenson DW, Smith B, Preece J, Athreya B, Mungall CJ, Rensing S, Hiss M, Lang D, Reski R, Berardini TZ, Li D, Huala E, Schaeffer M, Menda N, Arnaud E, Shrestha R, Yamazaki Y, Jaiswal P. Cooper L, et al. Among authors: menda n. Plant Cell Physiol. 2013 Feb;54(2):e1. doi: 10.1093/pcp/pcs163. Epub 2012 Dec 5. Plant Cell Physiol. 2013. PMID: 23220694 Free PMC article.
solGS: a web-based tool for genomic selection.
Tecle IY, Edwards JD, Menda N, Egesi C, Rabbi IY, Kulakow P, Kawuki R, Jannink JL, Mueller LA. Tecle IY, et al. Among authors: menda n. BMC Bioinformatics. 2014 Dec 14;15(1):398. doi: 10.1186/s12859-014-0398-7. BMC Bioinformatics. 2014. PMID: 25495537 Free PMC article.
35 results