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Identification of constrained sequence elements across 239 primate genomes.
Kuderna LFK, Ulirsch JC, Rashid S, Ameen M, Sundaram L, Hickey G, Cox AJ, Gao H, Kumar A, Aguet F, Christmas MJ, Clawson H, Haeussler M, Janiak MC, Kuhlwilm M, Orkin JD, Bataillon T, Manu S, Valenzuela A, Bergman J, Rouselle M, Silva FE, Agueda L, Blanc J, Gut M, de Vries D, Goodhead I, Harris RA, Raveendran M, Jensen A, Chuma IS, Horvath JE, Hvilsom C, Juan D, Frandsen P, Schraiber JG, de Melo FR, Bertuol F, Byrne H, Sampaio I, Farias I, Valsecchi J, Messias M, da Silva MNF, Trivedi M, Rossi R, Hrbek T, Andriaholinirina N, Rabarivola CJ, Zaramody A, Jolly CJ, Phillips-Conroy J, Wilkerson G, Abee C, Simmons JH, Fernandez-Duque E, Kanthaswamy S, Shiferaw F, Wu D, Zhou L, Shao Y, Zhang G, Keyyu JD, Knauf S, Le MD, Lizano E, Merker S, Navarro A, Nadler T, Khor CC, Lee J, Tan P, Lim WK, Kitchener AC, Zinner D, Gut I, Melin AD, Guschanski K, Schierup MH, Beck RMD, Karakikes I, Wang KC, Umapathy G, Roos C, Boubli JP, Siepel A, Kundaje A, Paten B, Lindblad-Toh K, Rogers J, Marques Bonet T, Farh KK. Kuderna LFK, et al. Among authors: melin ad. Nature. 2024 Jan;625(7996):735-742. doi: 10.1038/s41586-023-06798-8. Epub 2023 Nov 29. Nature. 2024. PMID: 38030727 Free PMC article.
Euarchontan Opsin Variation Brings New Focus to Primate Origins.
Melin AD, Wells K, Moritz GL, Kistler L, Orkin JD, Timm RM, Bernard H, Lakim MB, Perry GH, Kawamura S, Dominy NJ. Melin AD, et al. Mol Biol Evol. 2016 Apr;33(4):1029-41. doi: 10.1093/molbev/msv346. Epub 2016 Jan 6. Mol Biol Evol. 2016. PMID: 26739880 Free PMC article.
Amplification Dynamics of Platy-1 Retrotransposons in the Cebidae Platyrrhine Lineage.
Storer JM, Mierl JR, Brantley SA, Threeton B, Sukharutski Y, Rewerts LC, St Romain CP, Foreman MM, Baker JN, Walker JA, Orkin JD, Melin AD, Phillips KA, Konkel MK, Batzer MA. Storer JM, et al. Among authors: melin ad. Genome Biol Evol. 2019 Apr 1;11(4):1105-1116. doi: 10.1093/gbe/evz062. Genome Biol Evol. 2019. PMID: 30888417 Free PMC article.
Comparative ACE2 variation and primate COVID-19 risk.
Melin AD, Janiak MC, Marrone F 3rd, Arora PS, Higham JP. Melin AD, et al. bioRxiv [Preprint]. 2020 Jul 21:2020.04.09.034967. doi: 10.1101/2020.04.09.034967. bioRxiv. 2020. PMID: 32511330 Free PMC article. Updated. Preprint.
Comparative ACE2 variation and primate COVID-19 risk.
Melin AD, Janiak MC, Marrone F 3rd, Arora PS, Higham JP. Melin AD, et al. Commun Biol. 2020 Oct 27;3(1):641. doi: 10.1038/s42003-020-01370-w. Commun Biol. 2020. PMID: 33110195 Free PMC article.
83 results