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Scipion3: A workflow engine for cryo-electron microscopy image processing and structural biology.
Conesa P, Fonseca YC, Jiménez de la Morena J, Sharov G, de la Rosa-Trevín JM, Cuervo A, García Mena A, Rodríguez de Francisco B, Del Hoyo D, Herreros D, Marchan D, Strelak D, Fernández-Giménez E, Ramírez-Aportela E, de Isidro-Gómez FP, Sánchez I, Krieger J, Vilas JL, Del Cano L, Gragera M, Iceta M, Martínez M, Losana P, Melero R, Marabini R, Carazo JM, Sorzano COS. Conesa P, et al. Among authors: melero r. Biol Imaging. 2023 Jun 29;3:e13. doi: 10.1017/S2633903X23000132. eCollection 2023. Biol Imaging. 2023. PMID: 38510163 Free PMC article.
Validation of electron microscopy initial models via small angle X-ray scattering curves.
Jiménez A, Jonic S, Majtner T, Otón J, Vilas JL, Maluenda D, Mota J, Ramírez-Aportela E, Martínez M, Rancel Y, Segura J, Sánchez-García R, Melero R, Del Cano L, Conesa P, Skjaerven L, Marabini R, Carazo JM, Sorzano COS. Jiménez A, et al. Among authors: melero r. Bioinformatics. 2019 Jul 15;35(14):2427-2433. doi: 10.1093/bioinformatics/bty985. Bioinformatics. 2019. PMID: 30500892
Automatic local resolution-based sharpening of cryo-EM maps.
Ramírez-Aportela E, Vilas JL, Glukhova A, Melero R, Conesa P, Martínez M, Maluenda D, Mota J, Jiménez A, Vargas J, Marabini R, Sexton PM, Carazo JM, Sorzano COS. Ramírez-Aportela E, et al. Among authors: melero r. Bioinformatics. 2020 Feb 1;36(3):765-772. doi: 10.1093/bioinformatics/btz671. Bioinformatics. 2020. PMID: 31504163 Free PMC article.
Continuous flexibility analysis of SARS-CoV-2 Spike prefusion structures.
Melero R, Sorzano COS, Foster B, Vilas JL, Martínez M, Marabini R, Ramírez-Aportela E, Sanchez-Garcia R, Herreros D, Del Caño L, Losana P, Fonseca-Reyna YC, Conesa P, Wrapp D, Chacon P, McLellan JS, Tagare HD, Carazo JM. Melero R, et al. bioRxiv [Preprint]. 2020 Jul 8:2020.07.08.191072. doi: 10.1101/2020.07.08.191072. bioRxiv. 2020. PMID: 32676604 Free PMC article. Updated. Preprint.
Scipion Flexibility Hub: an integrative framework for advanced analysis of conformational heterogeneity in cryoEM.
Herreros D, Krieger JM, Fonseca Y, Conesa P, Harastani M, Vuillemot R, Hamitouche I, Serrano Gutiérrez R, Gragera M, Melero R, Jonic S, Carazo JM, Sorzano COS. Herreros D, et al. Among authors: melero r. Acta Crystallogr D Struct Biol. 2023 Jul 1;79(Pt 7):569-584. doi: 10.1107/S2059798323004497. Epub 2023 Jun 16. Acta Crystallogr D Struct Biol. 2023. PMID: 37326585 Free PMC article.
Structural analysis of receptors and actin polarity in platelet protrusions.
Sorrentino S, Conesa JJ, Cuervo A, Melero R, Martins B, Fernandez-Gimenez E, de Isidro-Gomez FP, de la Morena J, Studt JD, Sorzano COS, Eibauer M, Carazo JM, Medalia O. Sorrentino S, et al. Among authors: melero r. Proc Natl Acad Sci U S A. 2021 Sep 14;118(37):e2105004118. doi: 10.1073/pnas.2105004118. Proc Natl Acad Sci U S A. 2021. PMID: 34504018 Free PMC article.
Continuous flexibility analysis of SARS-CoV-2 spike prefusion structures.
Melero R, Sorzano COS, Foster B, Vilas JL, Martínez M, Marabini R, Ramírez-Aportela E, Sanchez-Garcia R, Herreros D, Del Caño L, Losana P, Fonseca-Reyna YC, Conesa P, Wrapp D, Chacon P, McLellan JS, Tagare HD, Carazo JM. Melero R, et al. IUCrJ. 2020 Sep 29;7(Pt 6):1059-69. doi: 10.1107/S2052252520012725. Online ahead of print. IUCrJ. 2020. PMID: 33063791 Free PMC article.
100 results