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A platinum standard pan-genome resource that represents the population structure of Asian rice.
Zhou Y, Chebotarov D, Kudrna D, Llaca V, Lee S, Rajasekar S, Mohammed N, Al-Bader N, Sobel-Sorenson C, Parakkal P, Arbelaez LJ, Franco N, Alexandrov N, Hamilton NRS, Leung H, Mauleon R, Lorieux M, Zuccolo A, McNally K, Zhang J, Wing RA. Zhou Y, et al. Among authors: mcnally k. Sci Data. 2020 Apr 7;7(1):113. doi: 10.1038/s41597-020-0438-2. Sci Data. 2020. PMID: 32265447 Free PMC article.
Genomewide SNP variation reveals relationships among landraces and modern varieties of rice.
McNally KL, Childs KL, Bohnert R, Davidson RM, Zhao K, Ulat VJ, Zeller G, Clark RM, Hoen DR, Bureau TE, Stokowski R, Ballinger DG, Frazer KA, Cox DR, Padhukasahasram B, Bustamante CD, Weigel D, Mackill DJ, Bruskiewich RM, Rätsch G, Buell CR, Leung H, Leach JE. McNally KL, et al. Proc Natl Acad Sci U S A. 2009 Jul 28;106(30):12273-8. doi: 10.1073/pnas.0900992106. Epub 2009 Jul 13. Proc Natl Acad Sci U S A. 2009. PMID: 19597147 Free PMC article.
Genetic variation in biomass traits among 20 diverse rice varieties.
Jahn CE, Mckay JK, Mauleon R, Stephens J, McNally KL, Bush DR, Leung H, Leach JE. Jahn CE, et al. Among authors: mcnally kl. Plant Physiol. 2011 Jan;155(1):157-68. doi: 10.1104/pp.110.165654. Epub 2010 Nov 9. Plant Physiol. 2011. PMID: 21062890 Free PMC article.
SNP-Seek database of SNPs derived from 3000 rice genomes.
Alexandrov N, Tai S, Wang W, Mansueto L, Palis K, Fuentes RR, Ulat VJ, Chebotarov D, Zhang G, Li Z, Mauleon R, Hamilton RS, McNally KL. Alexandrov N, et al. Among authors: mcnally kl. Nucleic Acids Res. 2015 Jan;43(Database issue):D1023-7. doi: 10.1093/nar/gku1039. Epub 2014 Nov 27. Nucleic Acids Res. 2015. PMID: 25429973 Free PMC article.
Environmental Response and Genomic Regions Correlated with Rice Root Growth and Yield under Drought in the OryzaSNP Panel across Multiple Study Systems.
Wade LJ, Bartolome V, Mauleon R, Vasant VD, Prabakar SM, Chelliah M, Kameoka E, Nagendra K, Reddy KR, Varma CM, Patil KG, Shrestha R, Al-Shugeairy Z, Al-Ogaidi F, Munasinghe M, Gowda V, Semon M, Suralta RR, Shenoy V, Vadez V, Serraj R, Shashidhar HE, Yamauchi A, Babu RC, Price A, McNally KL, Henry A. Wade LJ, et al. Among authors: mcnally kl. PLoS One. 2015 Apr 24;10(4):e0124127. doi: 10.1371/journal.pone.0124127. eCollection 2015. PLoS One. 2015. PMID: 25909711 Free PMC article.
Allele mining and enhanced genetic recombination for rice breeding.
Leung H, Raghavan C, Zhou B, Oliva R, Choi IR, Lacorte V, Jubay ML, Cruz CV, Gregorio G, Singh RK, Ulat VJ, Borja FN, Mauleon R, Alexandrov NN, McNally KL, Sackville Hamilton R. Leung H, et al. Rice (N Y). 2015 Dec;8(1):34. doi: 10.1186/s12284-015-0069-y. Epub 2015 Nov 25. Rice (N Y). 2015. PMID: 26606925 Free PMC article.
Open access resources for genome-wide association mapping in rice.
McCouch SR, Wright MH, Tung CW, Maron LG, McNally KL, Fitzgerald M, Singh N, DeClerck G, Agosto-Perez F, Korniliev P, Greenberg AJ, Naredo ME, Mercado SM, Harrington SE, Shi Y, Branchini DA, Kuser-Falcão PR, Leung H, Ebana K, Yano M, Eizenga G, McClung A, Mezey J. McCouch SR, et al. Among authors: mcnally kl. Nat Commun. 2016 Feb 4;7:10532. doi: 10.1038/ncomms10532. Nat Commun. 2016. PMID: 26842267 Free PMC article.
291 results