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Homology-Aware Phylogenomics at Gigabase Scales.
Sanderson MJ, Nicolae M, McMahon MM. Sanderson MJ, et al. Among authors: mcmahon mm. Syst Biol. 2017 Jul 1;66(4):590-603. doi: 10.1093/sysbio/syw104. Syst Biol. 2017. PMID: 28123115 Free PMC article.
Impacts of Terraces on Phylogenetic Inference.
Sanderson MJ, McMahon MM, Stamatakis A, Zwickl DJ, Steel M. Sanderson MJ, et al. Among authors: mcmahon mm. Syst Biol. 2015 Sep;64(5):709-26. doi: 10.1093/sysbio/syv024. Epub 2015 May 20. Syst Biol. 2015. PMID: 25999395
Extensive gene tree discordance and hemiplasy shaped the genomes of North American columnar cacti.
Copetti D, Búrquez A, Bustamante E, Charboneau JLM, Childs KL, Eguiarte LE, Lee S, Liu TL, McMahon MM, Whiteman NK, Wing RA, Wojciechowski MF, Sanderson MJ. Copetti D, et al. Among authors: mcmahon mm. Proc Natl Acad Sci U S A. 2017 Nov 7;114(45):12003-12008. doi: 10.1073/pnas.1706367114. Epub 2017 Oct 23. Proc Natl Acad Sci U S A. 2017. PMID: 29078296 Free PMC article.
Terraces in phylogenetic tree space.
Sanderson MJ, McMahon MM, Steel M. Sanderson MJ, et al. Among authors: mcmahon mm. Science. 2011 Jul 22;333(6041):448-50. doi: 10.1126/science.1206357. Epub 2011 Jun 16. Science. 2011. PMID: 21680810
STBase: one million species trees for comparative biology.
McMahon MM, Deepak A, Fernández-Baca D, Boss D, Sanderson MJ. McMahon MM, et al. PLoS One. 2015 Feb 13;10(2):e0117987. doi: 10.1371/journal.pone.0117987. eCollection 2015. PLoS One. 2015. PMID: 25679219 Free PMC article.
101 results