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Growth-dependent Gene Expression Variation Influences the Strength of Codon Usage Biases.
Mol Biol Evol. 2023 Sep 1;40(9):msad189. doi: 10.1093/molbev/msad189.
Mol Biol Evol. 2023.
PMID: 37619989
Free PMC article.
pLannotate: engineered plasmid annotation.
McGuffie MJ, Barrick JE.
McGuffie MJ, et al.
Nucleic Acids Res. 2021 Jul 2;49(W1):W516-W522. doi: 10.1093/nar/gkab374.
Nucleic Acids Res. 2021.
PMID: 34019636
Free PMC article.
Item in Clipboard
Measuring the burden of hundreds of BioBricks defines an evolutionary limit on constructability in synthetic biology.
Radde N, Mortensen GA, Bhat D, Shah S, Clements JJ, Leonard SP, McGuffie MJ, Mishler DM, Barrick JE.
Radde N, et al. Among authors: mcguffie mj.
bioRxiv [Preprint]. 2024 Apr 8:2024.04.08.588465. doi: 10.1101/2024.04.08.588465.
bioRxiv. 2024.
PMID: 38645188
Free PMC article.
Preprint.
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Identifying widespread and recurrent variants of genetic parts to improve annotation of engineered DNA sequences.
McGuffie MJ, Barrick JE.
McGuffie MJ, et al.
bioRxiv [Preprint]. 2023 Apr 10:2023.04.10.536277. doi: 10.1101/2023.04.10.536277.
bioRxiv. 2023.
PMID: 37090600
Free PMC article.
Preprint.
Item in Clipboard
Growth-dependent gene expression variation influences the strength of codon usage biases.
Johnson MM, Hockenberry AJ, McGuffie MJ, Vieira LC, Wilke CO.
Johnson MM, et al. Among authors: mcguffie mj.
bioRxiv [Preprint]. 2023 Jul 13:2023.03.14.532645. doi: 10.1101/2023.03.14.532645.
bioRxiv. 2023.
PMID: 36993177
Free PMC article.
Updated.
Preprint.
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Functional Analysis of Bacteriophage Immunity through a Type I-E CRISPR-Cas System in Vibrio cholerae and Its Application in Bacteriophage Genome Engineering.
Box AM, McGuffie MJ, O'Hara BJ, Seed KD.
Box AM, et al. Among authors: mcguffie mj.
J Bacteriol. 2015 Nov 23;198(3):578-90. doi: 10.1128/JB.00747-15. Print 2016 Feb 1.
J Bacteriol. 2015.
PMID: 26598368
Free PMC article.
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Zinc oxide nanoparticle suspensions and layer-by-layer coatings inhibit staphylococcal growth.
McGuffie MJ, Hong J, Bahng JH, Glynos E, Green PF, Kotov NA, Younger JG, VanEpps JS.
McGuffie MJ, et al.
Nanomedicine. 2016 Jan;12(1):33-42. doi: 10.1016/j.nano.2015.10.002. Epub 2015 Oct 27.
Nanomedicine. 2016.
PMID: 26515755
Free PMC article.
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