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Genome-wide analysis of the world's sheep breeds reveals high levels of historic mixture and strong recent selection.
Kijas JW, Lenstra JA, Hayes B, Boitard S, Porto Neto LR, San Cristobal M, Servin B, McCulloch R, Whan V, Gietzen K, Paiva S, Barendse W, Ciani E, Raadsma H, McEwan J, Dalrymple B; International Sheep Genomics Consortium Members. Kijas JW, et al. Among authors: mcewan j. PLoS Biol. 2012 Feb;10(2):e1001258. doi: 10.1371/journal.pbio.1001258. Epub 2012 Feb 7. PLoS Biol. 2012. PMID: 22346734 Free PMC article.
Linkage disequilibrium in domestic sheep.
McRae AF, McEwan JC, Dodds KG, Wilson T, Crawford AM, Slate J. McRae AF, et al. Among authors: mcewan jc. Genetics. 2002 Mar;160(3):1113-22. doi: 10.1093/genetics/160.3.1113. Genetics. 2002. PMID: 11901127 Free PMC article.
Using comparative genomics to reorder the human genome sequence into a virtual sheep genome.
Dalrymple BP, Kirkness EF, Nefedov M, McWilliam S, Ratnakumar A, Barris W, Zhao S, Shetty J, Maddox JF, O'Grady M, Nicholas F, Crawford AM, Smith T, de Jong PJ, McEwan J, Oddy VH, Cockett NE; International Sheep Genomics Consortium. Dalrymple BP, et al. Among authors: mcewan j. Genome Biol. 2007;8(7):R152. doi: 10.1186/gb-2007-8-7-r152. Genome Biol. 2007. PMID: 17663790 Free PMC article.
A multiway analysis for identifying high integrity bovine BACs.
Ratnakumar A, Barris W, McWilliam S, Brauning R, McEwan JC, Snelling WM, Dalrymple BP. Ratnakumar A, et al. BMC Genomics. 2009 Jan 23;10:46. doi: 10.1186/1471-2164-10-46. BMC Genomics. 2009. PMID: 19166603 Free PMC article.
A genome wide survey of SNP variation reveals the genetic structure of sheep breeds.
Kijas JW, Townley D, Dalrymple BP, Heaton MP, Maddox JF, McGrath A, Wilson P, Ingersoll RG, McCulloch R, McWilliam S, Tang D, McEwan J, Cockett N, Oddy VH, Nicholas FW, Raadsma H; International Sheep Genomics Consortium. Kijas JW, et al. Among authors: mcewan j. PLoS One. 2009;4(3):e4668. doi: 10.1371/journal.pone.0004668. Epub 2009 Mar 3. PLoS One. 2009. PMID: 19270757 Free PMC article.
Genome-wide survey of SNP variation uncovers the genetic structure of cattle breeds.
Bovine HapMap Consortium; Gibbs RA, Taylor JF, Van Tassell CP, Barendse W, Eversole KA, Gill CA, Green RD, Hamernik DL, Kappes SM, Lien S, Matukumalli LK, McEwan JC, Nazareth LV, Schnabel RD, Weinstock GM, Wheeler DA, Ajmone-Marsan P, Boettcher PJ, Caetano AR, Garcia JF, Hanotte O, Mariani P, Skow LC, Sonstegard TS, Williams JL, Diallo B, Hailemariam L, Martinez ML, Morris CA, Silva LO, Spelman RJ, Mulatu W, Zhao K, Abbey CA, Agaba M, Araujo FR, Bunch RJ, Burton J, Gorni C, Olivier H, Harrison BE, Luff B, Machado MA, Mwakaya J, Plastow G, Sim W, Smith T, Thomas MB, Valentini A, Williams P, Womack J, Woolliams JA, Liu Y, Qin X, Worley KC, Gao C, Jiang H, Moore SS, Ren Y, Song XZ, Bustamante CD, Hernandez RD, Muzny DM, Patil S, San Lucas A, Fu Q, Kent MP, Vega R, Matukumalli A, McWilliam S, Sclep G, Bryc K, Choi J, Gao H, Grefenstette JJ, Murdoch B, Stella A, Villa-Angulo R, Wright M, Aerts J, Jann O, Negrini R, Goddard ME, Hayes BJ, Bradley DG, Barbosa da Silva M, Lau LP, Liu GE, Lynn DJ, Panzitta F, Dodds KG. Bovine HapMap Consortium, et al. Among authors: mcewan jc. Science. 2009 Apr 24;324(5926):528-32. doi: 10.1126/science.1167936. Science. 2009. PMID: 19390050 Free PMC article.
An examination of positive selection and changing effective population size in Angus and Holstein cattle populations (Bos taurus) using a high density SNP genotyping platform and the contribution of ancient polymorphism to genomic diversity in Domestic cattle.
MacEachern S, Hayes B, McEwan J, Goddard M. MacEachern S, et al. Among authors: mcewan j. BMC Genomics. 2009 Apr 24;10:181. doi: 10.1186/1471-2164-10-181. BMC Genomics. 2009. PMID: 19393053 Free PMC article.
The sheep genome reference sequence: a work in progress.
International Sheep Genomics Consortium; Archibald AL, Cockett NE, Dalrymple BP, Faraut T, Kijas JW, Maddox JF, McEwan JC, Hutton Oddy V, Raadsma HW, Wade C, Wang J, Wang W, Xun X. International Sheep Genomics Consortium, et al. Among authors: mcewan jc. Anim Genet. 2010 Oct;41(5):449-53. doi: 10.1111/j.1365-2052.2010.02100.x. Anim Genet. 2010. PMID: 20809919 Review.
353 results