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Publishing peer review materials.
Beck J, Funk K, Harrison M, McEntyre J, Breen J, Collings A, Donohoe P, Evans M, Flintoft L, Hamelers A, Hurst P, Lemberger T, Lin J, O'Connor N, Parkin M, Parker S, Rodgers P, Skipper M, Stoner M. Beck J, et al. Among authors: mcentyre j. F1000Res. 2018 Oct 17;7:1655. doi: 10.12688/f1000research.16460.1. eCollection 2018. F1000Res. 2018. PMID: 30416719 Free PMC article.
The EMBL-EBI channel.
McEntyre J, Birney E. McEntyre J, et al. F1000Res. 2016 Jan 12;5:52. doi: 10.12688/f1000research.7764.1. eCollection 2016. F1000Res. 2016. PMID: 26913196 Free PMC article.
REMBI: Recommended Metadata for Biological Images-enabling reuse of microscopy data in biology.
Sarkans U, Chiu W, Collinson L, Darrow MC, Ellenberg J, Grunwald D, Hériché JK, Iudin A, Martins GG, Meehan T, Narayan K, Patwardhan A, Russell MRG, Saibil HR, Strambio-De-Castillia C, Swedlow JR, Tischer C, Uhlmann V, Verkade P, Barlow M, Bayraktar O, Birney E, Catavitello C, Cawthorne C, Wagner-Conrad S, Duke E, Paul-Gilloteaux P, Gustin E, Harkiolaki M, Kankaanpää P, Lemberger T, McEntyre J, Moore J, Nicholls AW, Onami S, Parkinson H, Parsons M, Romanchikova M, Sofroniew N, Swoger J, Utz N, Voortman LM, Wong F, Zhang P, Kleywegt GJ, Brazma A. Sarkans U, et al. Among authors: mcentyre j. Nat Methods. 2021 Dec;18(12):1418-1422. doi: 10.1038/s41592-021-01166-8. Nat Methods. 2021. PMID: 34021280 Free PMC article.
Identifying ELIXIR Core Data Resources.
Durinx C, McEntyre J, Appel R, Apweiler R, Barlow M, Blomberg N, Cook C, Gasteiger E, Kim JH, Lopez R, Redaschi N, Stockinger H, Teixeira D, Valencia A. Durinx C, et al. Among authors: mcentyre j. F1000Res. 2016 Sep 30;5:ELIXIR-2422. doi: 10.12688/f1000research.9656.2. eCollection 2016. F1000Res. 2016. PMID: 27803796 Free PMC article.
The BioStudies database.
McEntyre J, Sarkans U, Brazma A. McEntyre J, et al. Mol Syst Biol. 2015 Dec 23;11(12):847. doi: 10.15252/msb.20156658. Mol Syst Biol. 2015. PMID: 26700850 Free PMC article.
GREENER principles for environmentally sustainable computational science.
Lannelongue L, Aronson HG, Bateman A, Birney E, Caplan T, Juckes M, McEntyre J, Morris AD, Reilly G, Inouye M. Lannelongue L, et al. Among authors: mcentyre j. Nat Comput Sci. 2023 Jun;3(6):514-521. doi: 10.1038/s43588-023-00461-y. Epub 2023 Jun 26. Nat Comput Sci. 2023. PMID: 38177425 Review.
EMBL's European Bioinformatics Institute (EMBL-EBI) in 2023.
Thakur M, Buniello A, Brooksbank C, Gurwitz KT, Hall M, Hartley M, Hulcoop DG, Leach AR, Marques D, Martin M, Mithani A, McDonagh EM, Mutasa-Gottgens E, Ochoa D, Perez-Riverol Y, Stephenson J, Varadi M, Velankar S, Vizcaino JA, Witham R, McEntyre J. Thakur M, et al. Among authors: mcentyre j. Nucleic Acids Res. 2024 Jan 5;52(D1):D10-D17. doi: 10.1093/nar/gkad1088. Nucleic Acids Res. 2024. PMID: 38015445 Free PMC article. Review.
EMBL's European Bioinformatics Institute (EMBL-EBI) in 2022.
Thakur M, Bateman A, Brooksbank C, Freeberg M, Harrison M, Hartley M, Keane T, Kleywegt G, Leach A, Levchenko M, Morgan S, McDonagh EM, Orchard S, Papatheodorou I, Velankar S, Vizcaino JA, Witham R, Zdrazil B, McEntyre J. Thakur M, et al. Among authors: mcentyre j. Nucleic Acids Res. 2023 Jan 6;51(D1):D9-D17. doi: 10.1093/nar/gkac1098. Nucleic Acids Res. 2023. PMID: 36477213 Free PMC article.
49 results