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First reported detection of the mobile colistin resistance genes, mcr-8 and mcr-9, in the Irish environment.
Cahill N, Hooban B, Fitzhenry K, Joyce A, O'Connor L, Miliotis G, McDonagh F, Burke L, Chueiri A, Farrell ML, Bray JE, Delappe N, Brennan W, Prendergast D, Gutierrez M, Burgess C, Cormican M, Morris D. Cahill N, et al. Among authors: mcdonagh f. Sci Total Environ. 2023 Jun 10;876:162649. doi: 10.1016/j.scitotenv.2023.162649. Epub 2023 Mar 10. Sci Total Environ. 2023. PMID: 36906027 Free article.
Medical Astro-Microbiology: Current Role and Future Challenges.
McDonagh F, Cormican M, Morris D, Burke L, Singh NK, Venkateswaran K, Miliotis G. McDonagh F, et al. J Indian Inst Sci. 2023 Apr 8:1-26. doi: 10.1007/s41745-023-00360-1. Online ahead of print. J Indian Inst Sci. 2023. PMID: 37362850 Free PMC article. Review.
Complete genome of an inhibitor-resistant blaTEM-30 encoding Escherichia coli sequence type 127 isolate identified in human saliva with a high genotypic virulence load.
McEvoy N, O'Connor A, McDonagh F, Lonappan AM, Farrell ML, Kovarova A, Burke L, Ryan K, Hallahan B, Miliotis G. McEvoy N, et al. Among authors: mcdonagh f. J Glob Antimicrob Resist. 2023 Dec;35:44-47. doi: 10.1016/j.jgar.2023.08.014. Epub 2023 Aug 27. J Glob Antimicrob Resist. 2023. PMID: 37643688 Free article.
Longitudinal carriage of antimicrobial resistant Enterobacterales in healthy individuals in Ireland - Assessing the impact of recreational water use on duration of carriage.
Farrell ML, Chueiri A, Maguire M, Kovářová A, Miliotis G, O'Connor L, McDonagh F, Duane S, Cormican M, Devane G, Tuohy A, DeLappe N, De Bock F, Burke LP, Morris D. Farrell ML, et al. Among authors: mcdonagh f. Sci Total Environ. 2023 Dec 20;905:167100. doi: 10.1016/j.scitotenv.2023.167100. Epub 2023 Sep 17. Sci Total Environ. 2023. PMID: 37717747 Free article.
Novel spore-forming species exhibiting intrinsic resistance to third- and fourth-generation cephalosporins and description of Tigheibacillus jepli gen. nov., sp. nov.
Miliotis G, Sengupta P, Hameed A, Chuvochina M, McDonagh F, Simpson AC, Parker CW, Singh NK, Rekha PD, Morris D, Raman K, Kyrpides NC, Hugenholtz P, Venkateswaran K. Miliotis G, et al. Among authors: mcdonagh f. mBio. 2024 Apr 10;15(4):e0018124. doi: 10.1128/mbio.00181-24. Epub 2024 Mar 13. mBio. 2024. PMID: 38477597 Free PMC article.
APOLLO: A genome-scale metabolic reconstruction resource of 247,092 diverse human microbes spanning multiple continents, age groups, and body sites.
Heinken A, Hulshof TO, Nap B, Martinelli F, Basile A, O'Brolchain A, O'Sullivan NF, Gallagher C, Magee E, McDonagh F, Lalor I, Bergin M, Evans P, Daly R, Farrell R, Delaney RM, Hill S, McAuliffe SR, Kilgannon T, Fleming RMT, Thinnes CC, Thiele I. Heinken A, et al. Among authors: mcdonagh f. bioRxiv [Preprint]. 2023 Oct 3:2023.10.02.560573. doi: 10.1101/2023.10.02.560573. bioRxiv. 2023. PMID: 37873072 Free PMC article. Preprint.
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