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A Workflow of Integrated Resources to Catalyze Network Pharmacology Driven COVID-19 Research.
Zahoránszky-Kőhalmi G, Siramshetty VB, Kumar P, Gurumurthy M, Grillo B, Mathew B, Metaxatos D, Backus M, Mierzwa T, Simon R, Grishagin I, Brovold L, Mathé EA, Hall MD, Michael SG, Godfrey AG, Mestres J, Jensen LJ, Oprea TI. Zahoránszky-Kőhalmi G, et al. Among authors: mathe ea. bioRxiv [Preprint]. 2020 Nov 5:2020.11.04.369041. doi: 10.1101/2020.11.04.369041. bioRxiv. 2020. PMID: 33173863 Free PMC article. Updated. Preprint.
DEIA is essential to advance the goals of translational science: Perspectives from NCATS.
Hussain SF, Vogel AL, Faupel-Badger JM, Ho L, Akacem LD, Balakrishnan K, Geiger R, Gopal-Srivastava R, Haynes B, Hodges MG, Isler T, Mathé EA, Misquitta L, Sharma KR, Sid E, Zigterman JL, Burgoon PW. Hussain SF, et al. Among authors: mathe ea. J Clin Transl Sci. 2022 Nov 9;7(1):e33. doi: 10.1017/cts.2022.482. eCollection 2023. J Clin Transl Sci. 2022. PMID: 36845315 Free PMC article.
An OpenData portal to share COVID-19 drug repurposing data in real time.
Brimacombe KR, Zhao T, Eastman RT, Hu X, Wang K, Backus M, Baljinnyam B, Chen CZ, Chen L, Eicher T, Ferrer M, Fu Y, Gorshkov K, Guo H, Hanson QM, Itkin Z, Kales SC, Klumpp-Thomas C, Lee EM, Michael S, Mierzwa T, Patt A, Pradhan M, Renn A, Shinn P, Shrimp JH, Viraktamath A, Wilson KM, Xu M, Zakharov AV, Zhu W, Zheng W, Simeonov A, Mathé EA, Lo DC, Hall MD, Shen M. Brimacombe KR, et al. Among authors: mathe ea. bioRxiv [Preprint]. 2020 Jun 5:2020.06.04.135046. doi: 10.1101/2020.06.04.135046. bioRxiv. 2020. PMID: 32511420 Free PMC article. Preprint.
TCRD and Pharos 2021: mining the human proteome for disease biology.
Sheils TK, Mathias SL, Kelleher KJ, Siramshetty VB, Nguyen DT, Bologa CG, Jensen LJ, Vidović D, Koleti A, Schürer SC, Waller A, Yang JJ, Holmes J, Bocci G, Southall N, Dharkar P, Mathé E, Simeonov A, Oprea TI. Sheils TK, et al. Nucleic Acids Res. 2021 Jan 8;49(D1):D1334-D1346. doi: 10.1093/nar/gkaa993. Nucleic Acids Res. 2021. PMID: 33156327 Free PMC article.
NCATS Inxight Drugs: a comprehensive and curated portal for translational research.
Siramshetty VB, Grishagin I, Nguyễn ÐT, Peryea T, Skovpen Y, Stroganov O, Katzel D, Sheils T, Jadhav A, Mathé EA, Southall NT. Siramshetty VB, et al. Among authors: mathe ea. Nucleic Acids Res. 2022 Jan 7;50(D1):D1307-D1316. doi: 10.1093/nar/gkab918. Nucleic Acids Res. 2022. PMID: 34648031 Free PMC article.
A Workflow of Integrated Resources to Catalyze Network Pharmacology Driven COVID-19 Research.
Zahoránszky-Kőhalmi G, Siramshetty VB, Kumar P, Gurumurthy M, Grillo B, Mathew B, Metaxatos D, Backus M, Mierzwa T, Simon R, Grishagin I, Brovold L, Mathé EA, Hall MD, Michael SG, Godfrey AG, Mestres J, Jensen LJ, Oprea TI. Zahoránszky-Kőhalmi G, et al. Among authors: mathe ea. J Chem Inf Model. 2022 Feb 14;62(3):718-729. doi: 10.1021/acs.jcim.1c00431. Epub 2022 Jan 20. J Chem Inf Model. 2022. PMID: 35057621 Free PMC article.
Pharos 2023: an integrated resource for the understudied human proteome.
Kelleher KJ, Sheils TK, Mathias SL, Yang JJ, Metzger VT, Siramshetty VB, Nguyen DT, Jensen LJ, Vidović D, Schürer SC, Holmes J, Sharma KR, Pillai A, Bologa CG, Edwards JS, Mathé EA, Oprea TI. Kelleher KJ, et al. Among authors: mathe ea. Nucleic Acids Res. 2023 Jan 6;51(D1):D1405-D1416. doi: 10.1093/nar/gkac1033. Nucleic Acids Res. 2023. PMID: 36624666 Free PMC article.
Validating ADME QSAR Models Using Marketed Drugs.
Siramshetty V, Williams J, Nguyễn ÐT, Neyra J, Southall N, Mathé E, Xu X, Shah P. Siramshetty V, et al. SLAS Discov. 2021 Dec;26(10):1326-1336. doi: 10.1177/24725552211017520. Epub 2021 Jun 26. SLAS Discov. 2021. PMID: 34176369 Free article.
88 results