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Genome assembly and geospatial phylogenomics of the bed bug Cimex lectularius.
Rosenfeld JA, Reeves D, Brugler MR, Narechania A, Simon S, Durrett R, Foox J, Shianna K, Schatz MC, Gandara J, Afshinnekoo E, Lam ET, Hastie AR, Chan S, Cao H, Saghbini M, Kentsis A, Planet PJ, Kholodovych V, Tessler M, Baker R, DeSalle R, Sorkin LN, Kolokotronis SO, Siddall ME, Amato G, Mason CE. Rosenfeld JA, et al. Among authors: mason ce. Nat Commun. 2016 Feb 2;7:10164. doi: 10.1038/ncomms10164. Nat Commun. 2016. PMID: 26836631 Free PMC article.
A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages.
Yu Y, Fuscoe JC, Zhao C, Guo C, Jia M, Qing T, Bannon DI, Lancashire L, Bao W, Du T, Luo H, Su Z, Jones WD, Moland CL, Branham WS, Qian F, Ning B, Li Y, Hong H, Guo L, Mei N, Shi T, Wang KY, Wolfinger RD, Nikolsky Y, Walker SJ, Duerksen-Hughes P, Mason CE, Tong W, Thierry-Mieg J, Thierry-Mieg D, Shi L, Wang C. Yu Y, et al. Among authors: mason ce. Nat Commun. 2014;5:3230. doi: 10.1038/ncomms4230. Nat Commun. 2014. PMID: 24510058 Free PMC article.
Multi-platform assessment of transcriptome profiling using RNA-seq in the ABRF next-generation sequencing study.
Li S, Tighe SW, Nicolet CM, Grove D, Levy S, Farmerie W, Viale A, Wright C, Schweitzer PA, Gao Y, Kim D, Boland J, Hicks B, Kim R, Chhangawala S, Jafari N, Raghavachari N, Gandara J, Garcia-Reyero N, Hendrickson C, Roberson D, Rosenfeld J, Smith T, Underwood JG, Wang M, Zumbo P, Baldwin DA, Grills GS, Mason CE. Li S, et al. Among authors: mason ce. Nat Biotechnol. 2014 Sep;32(9):915-925. doi: 10.1038/nbt.2972. Epub 2014 Aug 24. Nat Biotechnol. 2014. PMID: 25150835 Free PMC article.
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures.
Munro SA, Lund SP, Pine PS, Binder H, Clevert DA, Conesa A, Dopazo J, Fasold M, Hochreiter S, Hong H, Jafari N, Kreil DP, Łabaj PP, Li S, Liao Y, Lin SM, Meehan J, Mason CE, Santoyo-Lopez J, Setterquist RA, Shi L, Shi W, Smyth GK, Stralis-Pavese N, Su Z, Tong W, Wang C, Wang J, Xu J, Ye Z, Yang Y, Yu Y, Salit M. Munro SA, et al. Among authors: mason ce. Nat Commun. 2014 Sep 25;5:5125. doi: 10.1038/ncomms6125. Nat Commun. 2014. PMID: 25254650 Free article.
Assembly and diploid architecture of an individual human genome via single-molecule technologies.
Pendleton M, Sebra R, Pang AW, Ummat A, Franzen O, Rausch T, Stütz AM, Stedman W, Anantharaman T, Hastie A, Dai H, Fritz MH, Cao H, Cohain A, Deikus G, Durrett RE, Blanchard SC, Altman R, Chin CS, Guo Y, Paxinos EE, Korbel JO, Darnell RB, McCombie WR, Kwok PY, Mason CE, Schadt EE, Bashir A. Pendleton M, et al. Among authors: mason ce. Nat Methods. 2015 Aug;12(8):780-6. doi: 10.1038/nmeth.3454. Epub 2015 Jun 29. Nat Methods. 2015. PMID: 26121404 Free PMC article.
375 results