Martin WF - Search Results

1

Late Mitochondrial Origin Is an Artifact.

Martin WF, Roettger M, Ku C, Garg SG, Nelson-Sathi S, Landan G. Martin WF, et al. Genome Biol Evol. 2017 Feb 1;9(2):373-379. doi: 10.1093/gbe/evx027. Genome Biol Evol. 2017. PMID: 28199635 Free PMC article.

2

Compartment-specific isoforms of TPI and GAPDH are imported into diatom mitochondria as a fusion protein: evidence in favor of a mitochondrial origin of the eukaryotic glycolytic pathway.

Liaud MF, Lichtlé C, Apt K, Martin W, Cerff R. Liaud MF, et al. Mol Biol Evol. 2000 Feb;17(2):213-23. doi: 10.1093/oxfordjournals.molbev.a026301. Mol Biol Evol. 2000. PMID: 10677844

3

Single eubacterial origin of eukaryotic sulfide:quinone oxidoreductase, a mitochondrial enzyme conserved from the early evolution of eukaryotes during anoxic and sulfidic times.

Theissen U, Hoffmeister M, Grieshaber M, Martin W. Theissen U, et al. Mol Biol Evol. 2003 Sep;20(9):1564-74. doi: 10.1093/molbev/msg174. Epub 2003 Jun 27. Mol Biol Evol. 2003. PMID: 12832624

4

Identification of prokaryotic homologues indicates an endosymbiotic origin for the alternative oxidases of mitochondria (AOX) and chloroplasts (PTOX).

Atteia A, van Lis R, van Hellemond JJ, Tielens AG, Martin W, Henze K. Atteia A, et al. Gene. 2004 Apr 14;330:143-8. doi: 10.1016/j.gene.2004.01.015. Gene. 2004. PMID: 15087133

5

A genome phylogeny for mitochondria among alpha-proteobacteria and a predominantly eubacterial ancestry of yeast nuclear genes.

Esser C, Ahmadinejad N, Wiegand C, Rotte C, Sebastiani F, Gelius-Dietrich G, Henze K, Kretschmann E, Richly E, Leister D, Bryant D, Steel MA, Lockhart PJ, Penny D, Martin W. Esser C, et al. Mol Biol Evol. 2004 Sep;21(9):1643-60. doi: 10.1093/molbev/msh160. Epub 2004 May 21. Mol Biol Evol. 2004. PMID: 15155797

6

A reality check for alignments and trees.

Martin W, Roettger M, Lockhart PJ. Martin W, et al. Trends Genet. 2007 Oct;23(10):478-80. doi: 10.1016/j.tig.2007.08.007. Epub 2007 Sep 7. Trends Genet. 2007. PMID: 17825944

7

Genes of cyanobacterial origin in plant nuclear genomes point to a heterocyst-forming plastid ancestor.

Deusch O, Landan G, Roettger M, Gruenheit N, Kowallik KV, Allen JF, Martin W, Dagan T. Deusch O, et al. Mol Biol Evol. 2008 Apr;25(4):748-61. doi: 10.1093/molbev/msn022. Epub 2008 Jan 24. Mol Biol Evol. 2008. PMID: 18222943

8

A machine-learning approach reveals that alignment properties alone can accurately predict inference of lateral gene transfer from discordant phylogenies.

Roettger M, Martin W, Dagan T. Roettger M, et al. Mol Biol Evol. 2009 Sep;26(9):1931-9. doi: 10.1093/molbev/msp105. Epub 2009 May 14. Mol Biol Evol. 2009. PMID: 19443855

9

Genome networks root the tree of life between prokaryotic domains.

Dagan T, Roettger M, Bryant D, Martin W. Dagan T, et al. Genome Biol Evol. 2010 Jul 12;2:379-92. doi: 10.1093/gbe/evq025. Genome Biol Evol. 2010. PMID: 20624742 Free PMC article.

10

Networks of gene sharing among 329 proteobacterial genomes reveal differences in lateral gene transfer frequency at different phylogenetic depths.

Kloesges T, Popa O, Martin W, Dagan T. Kloesges T, et al. Mol Biol Evol. 2011 Feb;28(2):1057-74. doi: 10.1093/molbev/msq297. Epub 2010 Nov 8. Mol Biol Evol. 2011. PMID: 21059789 Free PMC article.

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