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A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis.
Zhang R, Kuo R, Coulter M, Calixto CPG, Entizne JC, Guo W, Marquez Y, Milne L, Riegler S, Matsui A, Tanaka M, Harvey S, Gao Y, Wießner-Kroh T, Paniagua A, Crespi M, Denby K, Hur AB, Huq E, Jantsch M, Jarmolowski A, Koester T, Laubinger S, Li QQ, Gu L, Seki M, Staiger D, Sunkar R, Szweykowska-Kulinska Z, Tu SL, Wachter A, Waugh R, Xiong L, Zhang XN, Conesa A, Reddy ASN, Barta A, Kalyna M, Brown JWS. Zhang R, et al. Among authors: marquez y. Genome Biol. 2022 Jul 7;23(1):149. doi: 10.1186/s13059-022-02711-0. Genome Biol. 2022. PMID: 35799267 Free PMC article.
Complexity of the alternative splicing landscape in plants.
Reddy AS, Marquez Y, Kalyna M, Barta A. Reddy AS, et al. Among authors: marquez y. Plant Cell. 2013 Oct;25(10):3657-83. doi: 10.1105/tpc.113.117523. Epub 2013 Oct 31. Plant Cell. 2013. PMID: 24179125 Free PMC article. Review.
A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing.
Zhang R, Calixto CPG, Marquez Y, Venhuizen P, Tzioutziou NA, Guo W, Spensley M, Entizne JC, Lewandowska D, Ten Have S, Frei Dit Frey N, Hirt H, James AB, Nimmo HG, Barta A, Kalyna M, Brown JWS. Zhang R, et al. Among authors: marquez y. Nucleic Acids Res. 2017 May 19;45(9):5061-5073. doi: 10.1093/nar/gkx267. Nucleic Acids Res. 2017. PMID: 28402429 Free PMC article.
Alternative splicing in plants--coming of age.
Syed NH, Kalyna M, Marquez Y, Barta A, Brown JW. Syed NH, et al. Among authors: marquez y. Trends Plant Sci. 2012 Oct;17(10):616-23. doi: 10.1016/j.tplants.2012.06.001. Epub 2012 Jun 27. Trends Plant Sci. 2012. PMID: 22743067 Free PMC article. Review.
43 results