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LYRA, a webserver for lymphocyte receptor structural modeling.
Klausen MS, Anderson MV, Jespersen MC, Nielsen M, Marcatili P. Klausen MS, et al. Among authors: marcatili p. Nucleic Acids Res. 2015 Jul 1;43(W1):W349-55. doi: 10.1093/nar/gkv535. Epub 2015 May 24. Nucleic Acids Res. 2015. PMID: 26007650 Free PMC article.
Prediction of Antibody Epitopes.
Nielsen M, Marcatili P. Nielsen M, et al. Among authors: marcatili p. Methods Mol Biol. 2015;1348:23-32. doi: 10.1007/978-1-4939-2999-3_4. Methods Mol Biol. 2015. PMID: 26424260
T cell receptor fingerprinting enables in-depth characterization of the interactions governing recognition of peptide-MHC complexes.
Bentzen AK, Such L, Jensen KK, Marquard AM, Jessen LE, Miller NJ, Church CD, Lyngaa R, Koelle DM, Becker JC, Linnemann C, Schumacher TNM, Marcatili P, Nghiem P, Nielsen M, Hadrup SR. Bentzen AK, et al. Among authors: marcatili p. Nat Biotechnol. 2018 Nov 19:10.1038/nbt.4303. doi: 10.1038/nbt.4303. Online ahead of print. Nat Biotechnol. 2018. PMID: 30451992 Free PMC article.
Epitope Specific Antibodies and T Cell Receptors in the Immune Epitope Database.
Mahajan S, Vita R, Shackelford D, Lane J, Schulten V, Zarebski L, Jespersen MC, Marcatili P, Nielsen M, Sette A, Peters B. Mahajan S, et al. Among authors: marcatili p. Front Immunol. 2018 Nov 20;9:2688. doi: 10.3389/fimmu.2018.02688. eCollection 2018. Front Immunol. 2018. PMID: 30515166 Free PMC article.
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