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The efficacy of whole human genome capture on ancient dental calculus and dentin.
Ziesemer KA, Ramos-Madrigal J, Mann AE, Brandt BW, Sankaranarayanan K, Ozga AT, Hoogland M, Hofman CA, Salazar-García DC, Frohlich B, Milner GR, Stone AC, Aldenderfer M, Lewis CM Jr, Hofman CL, Warinner C, Schroeder H. Ziesemer KA, et al. Among authors: mann ae. Am J Phys Anthropol. 2019 Mar;168(3):496-509. doi: 10.1002/ajpa.23763. Epub 2018 Dec 26. Am J Phys Anthropol. 2019. PMID: 30586168 Free PMC article.
Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification.
Ziesemer KA, Mann AE, Sankaranarayanan K, Schroeder H, Ozga AT, Brandt BW, Zaura E, Waters-Rist A, Hoogland M, Salazar-García DC, Aldenderfer M, Speller C, Hendy J, Weston DA, MacDonald SJ, Thomas GH, Collins MJ, Lewis CM, Hofman C, Warinner C. Ziesemer KA, et al. Among authors: mann ae. Sci Rep. 2015 Nov 13;5:16498. doi: 10.1038/srep16498. Sci Rep. 2015. PMID: 26563586 Free PMC article.
Differential preservation of endogenous human and microbial DNA in dental calculus and dentin.
Mann AE, Sabin S, Ziesemer K, Vågene ÅJ, Schroeder H, Ozga AT, Sankaranarayanan K, Hofman CA, Fellows Yates JA, Salazar-García DC, Frohlich B, Aldenderfer M, Hoogland M, Read C, Milner GR, Stone AC, Lewis CM Jr, Krause J, Hofman C, Bos KI, Warinner C. Mann AE, et al. Sci Rep. 2018 Jun 29;8(1):9822. doi: 10.1038/s41598-018-28091-9. Sci Rep. 2018. PMID: 29959351 Free PMC article.
A Robust Framework for Microbial Archaeology.
Warinner C, Herbig A, Mann A, Fellows Yates JA, Weiß CL, Burbano HA, Orlando L, Krause J. Warinner C, et al. Annu Rev Genomics Hum Genet. 2017 Aug 31;18:321-356. doi: 10.1146/annurev-genom-091416-035526. Epub 2017 Apr 26. Annu Rev Genomics Hum Genet. 2017. PMID: 28460196 Free PMC article. Review.
The evolution and changing ecology of the African hominid oral microbiome.
Fellows Yates JA, Velsko IM, Aron F, Posth C, Hofman CA, Austin RM, Parker CE, Mann AE, Nägele K, Arthur KW, Arthur JW, Bauer CC, Crevecoeur I, Cupillard C, Curtis MC, Dalén L, Díaz-Zorita Bonilla M, Díez Fernández-Lomana JC, Drucker DG, Escribano Escrivá E, Francken M, Gibbon VE, González Morales MR, Grande Mateu A, Harvati K, Henry AG, Humphrey L, Menéndez M, Mihailović D, Peresani M, Rodríguez Moroder S, Roksandic M, Rougier H, Sázelová S, Stock JT, Straus LG, Svoboda J, Teßmann B, Walker MJ, Power RC, Lewis CM, Sankaranarayanan K, Guschanski K, Wrangham RW, Dewhirst FE, Salazar-García DC, Krause J, Herbig A, Warinner C. Fellows Yates JA, et al. Among authors: mann ae. Proc Natl Acad Sci U S A. 2021 May 18;118(20):e2021655118. doi: 10.1073/pnas.2021655118. Proc Natl Acad Sci U S A. 2021. PMID: 33972424 Free PMC article.
Corrigendum: Intrinsic challenges in ancient microbiome reconstruction using 16S rRNA gene amplification.
Ziesemer KA, Mann AE, Sankaranarayanan K, Schroeder H, Ozga AT, Brandt BW, Zaura E, Waters-Rist A, Hoogland M, Salazar-García DC, Aldenderfer M, Speller C, Hendy J, Weston DA, MacDonald SJ, Thomas GH, Collins MJ, Lewis CM, Hofman C, Warinner C. Ziesemer KA, et al. Among authors: mann ae. Sci Rep. 2016 Jun 2;6:27163. doi: 10.1038/srep27163. Sci Rep. 2016. PMID: 27254246 Free PMC article. No abstract available.
American Gut: an Open Platform for Citizen Science Microbiome Research.
McDonald D, Hyde E, Debelius JW, Morton JT, Gonzalez A, Ackermann G, Aksenov AA, Behsaz B, Brennan C, Chen Y, DeRight Goldasich L, Dorrestein PC, Dunn RR, Fahimipour AK, Gaffney J, Gilbert JA, Gogul G, Green JL, Hugenholtz P, Humphrey G, Huttenhower C, Jackson MA, Janssen S, Jeste DV, Jiang L, Kelley ST, Knights D, Kosciolek T, Ladau J, Leach J, Marotz C, Meleshko D, Melnik AV, Metcalf JL, Mohimani H, Montassier E, Navas-Molina J, Nguyen TT, Peddada S, Pevzner P, Pollard KS, Rahnavard G, Robbins-Pianka A, Sangwan N, Shorenstein J, Smarr L, Song SJ, Spector T, Swafford AD, Thackray VG, Thompson LR, Tripathi A, Vázquez-Baeza Y, Vrbanac A, Wischmeyer P, Wolfe E, Zhu Q; American Gut Consortium; Knight R. McDonald D, et al. mSystems. 2018 May 15;3(3):e00031-18. doi: 10.1128/mSystems.00031-18. eCollection 2018 May-Jun. mSystems. 2018. PMID: 29795809 Free PMC article.
Biodiversity of protists and nematodes in the wild nonhuman primate gut.
Mann AE, Mazel F, Lemay MA, Morien E, Billy V, Kowalewski M, Di Fiore A, Link A, Goldberg TL, Tecot S, Baden AL, Gomez A, Sauther ML, Cuozzo FP, Rice GAO, Dominy NJ, Stumpf R, Lewis RJ, Swedell L, Amato K, Wegener Parfrey L. Mann AE, et al. ISME J. 2020 Feb;14(2):609-622. doi: 10.1038/s41396-019-0551-4. Epub 2019 Nov 12. ISME J. 2020. PMID: 31719654 Free PMC article.
26 results