Manabe N - Search Results

1

Phosphate-Catalyzed Succinimide Formation from Asp Residues: A Computational Study of the Mechanism.

Kirikoshi R, Manabe N, Takahashi O. Kirikoshi R, et al. Among authors: manabe n. Int J Mol Sci. 2018 Feb 24;19(2):637. doi: 10.3390/ijms19020637. Int J Mol Sci. 2018. PMID: 29495268 Free PMC article.

2

Roles of intramolecular and intermolecular hydrogen bonding in a three-water-assisted mechanism of succinimide formation from aspartic acid residues.

Takahashi O, Kirikoshi R, Manabe N. Takahashi O, et al. Among authors: manabe n. Molecules. 2014 Aug 4;19(8):11440-52. doi: 10.3390/molecules190811440. Molecules. 2014. PMID: 25093984 Free PMC article.

3

Acetic acid can catalyze succinimide formation from aspartic acid residues by a concerted bond reorganization mechanism: a computational study.

Takahashi O, Kirikoshi R, Manabe N. Takahashi O, et al. Among authors: manabe n. Int J Mol Sci. 2015 Jan 12;16(1):1613-26. doi: 10.3390/ijms16011613. Int J Mol Sci. 2015. PMID: 25588215 Free PMC article.

4

Glycolic acid-catalyzed deamidation of asparagine residues in degrading PLGA matrices: a computational study.

Manabe N, Kirikoshi R, Takahashi O. Manabe N, et al. Int J Mol Sci. 2015 Mar 31;16(4):7261-72. doi: 10.3390/ijms16047261. Int J Mol Sci. 2015. PMID: 25837471 Free PMC article.

5

Acetic acid-catalyzed formation of N-phenylphthalimide from phthalanilic acid: a computational study of the mechanism.

Takahashi O, Kirikoshi R, Manabe N. Takahashi O, et al. Among authors: manabe n. Int J Mol Sci. 2015 May 28;16(6):12174-84. doi: 10.3390/ijms160612174. Int J Mol Sci. 2015. PMID: 26030675 Free PMC article.

6

A Computational Study of the Mechanism of Succinimide Formation in the Asn-His Sequence: Intramolecular Catalysis by the His Side Chain.

Takahashi O, Manabe N, Kirikoshi R. Takahashi O, et al. Among authors: manabe n. Molecules. 2016 Mar 9;21(3):327. doi: 10.3390/molecules21030327. Molecules. 2016. PMID: 27005609 Free PMC article.

7

Molecular Dynamics Simulations to Investigate the Influences of Amino Acid Mutations on Protein Three-Dimensional Structures of Cytochrome P450 2D6.1, 2, 10, 14A, 51, and 62.

Fukuyoshi S, Kometani M, Watanabe Y, Hiratsuka M, Yamaotsu N, Hirono S, Manabe N, Takahashi O, Oda A. Fukuyoshi S, et al. Among authors: manabe n. PLoS One. 2016 Apr 5;11(4):e0152946. doi: 10.1371/journal.pone.0152946. eCollection 2016. PLoS One. 2016. PMID: 27046024 Free PMC article.

8

Racemization of the Succinimide Intermediate Formed in Proteins and Peptides: A Computational Study of the Mechanism Catalyzed by Dihydrogen Phosphate Ion.

Takahashi O, Kirikoshi R, Manabe N. Takahashi O, et al. Among authors: manabe n. Int J Mol Sci. 2016 Oct 10;17(10):1698. doi: 10.3390/ijms17101698. Int J Mol Sci. 2016. PMID: 27735868 Free PMC article.

9

Succinimide Formation from an NGR-Containing Cyclic Peptide: Computational Evidence for Catalytic Roles of Phosphate Buffer and the Arginine Side Chain.

Kirikoshi R, Manabe N, Takahashi O. Kirikoshi R, et al. Among authors: manabe n. Int J Mol Sci. 2017 Feb 16;18(2):429. doi: 10.3390/ijms18020429. Int J Mol Sci. 2017. PMID: 28212316 Free PMC article.

10

Phosphate-Catalyzed Succinimide Formation from an NGR-Containing Cyclic Peptide: A Novel Mechanism for Deammoniation of the Tetrahedral Intermediate.

Kirikoshi R, Manabe N, Takahashi O. Kirikoshi R, et al. Among authors: manabe n. Molecules. 2018 Aug 31;23(9):2217. doi: 10.3390/molecules23092217. Molecules. 2018. PMID: 30200364 Free PMC article.

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