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Page 1
Critical Assessment of Metagenome Interpretation: the second round of challenges.
Meyer F, Fritz A, Deng ZL, Koslicki D, Lesker TR, Gurevich A, Robertson G, Alser M, Antipov D, Beghini F, Bertrand D, Brito JJ, Brown CT, Buchmann J, Buluç A, Chen B, Chikhi R, Clausen PTLC, Cristian A, Dabrowski PW, Darling AE, Egan R, Eskin E, Georganas E, Goltsman E, Gray MA, Hansen LH, Hofmeyr S, Huang P, Irber L, Jia H, Jørgensen TS, Kieser SD, Klemetsen T, Kola A, Kolmogorov M, Korobeynikov A, Kwan J, LaPierre N, Lemaitre C, Li C, Limasset A, Malcher-Miranda F, Mangul S, Marcelino VR, Marchet C, Marijon P, Meleshko D, Mende DR, Milanese A, Nagarajan N, Nissen J, Nurk S, Oliker L, Paoli L, Peterlongo P, Piro VC, Porter JS, Rasmussen S, Rees ER, Reinert K, Renard B, Robertsen EM, Rosen GL, Ruscheweyh HJ, Sarwal V, Segata N, Seiler E, Shi L, Sun F, Sunagawa S, Sørensen SJ, Thomas A, Tong C, Trajkovski M, Tremblay J, Uritskiy G, Vicedomini R, Wang Z, Wang Z, Wang Z, Warren A, Willassen NP, Yelick K, You R, Zeller G, Zhao Z, Zhu S, Zhu J, Garrido-Oter R, Gastmeier P, Hacquard S, Häußler S, Khaledi A, Maechler F, Mesny F, Radutoiu S, Schulze-Lefert P, Smit N, Strowig T, Bremges A, Sczyrba A, McHardy AC. Meyer F, et al. Among authors: maechler f. Nat Methods. 2022 Apr;19(4):429-440. doi: 10.1038/s41592-022-01431-4. Epub 2022 Apr 8. Nat Methods. 2022. PMID: 35396482 Free PMC article.
Split k-mer analysis compared to cgMLST and SNP-based core genome analysis for detecting transmission of vancomycin-resistant enterococci: results from routine outbreak analyses across different hospitals and hospitals networks in Berlin, Germany.
Maechler F, Weber A, Schwengers O, Schwab F, Denkel L, Behnke M, Gastmeier P, Kola A. Maechler F, et al. Microb Genom. 2023 Jan;9(1):mgen000937. doi: 10.1099/mgen.0.000937. Microb Genom. 2023. PMID: 36748706 Free PMC article.
Multiresistente Erreger - Epidemiologie, Surveillance und Bedeutung.
Geffers C, Maechler F, Behnke M, Gastmeier P. Geffers C, et al. Among authors: maechler f. Anasthesiol Intensivmed Notfallmed Schmerzther. 2016 Feb;51(2):104-10; quiz 111. doi: 10.1055/s-0041-103348. Epub 2016 Mar 7. Anasthesiol Intensivmed Notfallmed Schmerzther. 2016. PMID: 26949905 Review. German.
Emergence of ESBL-producing Escherichia coli ST131-C1-M27 clade colonizing patients in Europe.
Merino I, Hernández-García M, Turrientes MC, Pérez-Viso B, López-Fresneña N, Diaz-Agero C, Maechler F, Fankhauser-Rodriguez C, Kola A, Schrenzel J, Harbarth S, Bonten M, Gastmeier P, Canton R, Ruiz-Garbajosa P; R-GNOSIS Study Group. Merino I, et al. Among authors: maechler f. J Antimicrob Chemother. 2018 Nov 1;73(11):2973-2980. doi: 10.1093/jac/dky296. J Antimicrob Chemother. 2018. PMID: 30124851
Contact isolation versus standard precautions to decrease acquisition of extended-spectrum β-lactamase-producing Enterobacterales in non-critical care wards: a cluster-randomised crossover trial.
Maechler F, Schwab F, Hansen S, Fankhauser C, Harbarth S, Huttner BD, Diaz-Agero C, Lopez N, Canton R, Ruiz-Garbajosa P, Blok H, Bonten MJ, Kloosterman F, Schotsman J, Cooper BS, Behnke M, Golembus J, Kola A, Gastmeier P; R-GNOSIS WP5 study group. Maechler F, et al. Lancet Infect Dis. 2020 May;20(5):575-584. doi: 10.1016/S1473-3099(19)30626-7. Epub 2020 Feb 19. Lancet Infect Dis. 2020. PMID: 32087113 Clinical Trial.
Quantification of time delay between screening and subsequent initiation of contact isolation for carriers of extended-spectrum beta-lactamase (ESBL)-producing Enterobacterales: A post hoc subgroup analysis of the R-GNOSIS WP5 Trial.
Maechler F, Schwab F, Hansen S, Behnke M, Bonten MJ, Canton R, Diaz Agero C, Fankhauser C, Harbarth S, Huttner BD, Kola A, Gastmeier P; R-GNOSIS WP5 Study Group. Maechler F, et al. Infect Control Hosp Epidemiol. 2023 Sep;44(9):1410-1416. doi: 10.1017/ice.2022.285. Epub 2023 Mar 13. Infect Control Hosp Epidemiol. 2023. PMID: 36912321 Free PMC article. Clinical Trial.
Screening for Methicillin-Resistant Staphylococcus aureus.
Wiese-Posselt M, Saydan S, Schwab F, Behnke M, Kola A, Kramer TS, Gastmeier P, Maechler F. Wiese-Posselt M, et al. Among authors: maechler f. Dtsch Arztebl Int. 2023 Jun 30;120(26):447-453. doi: 10.3238/arztebl.m2023.0117. Dtsch Arztebl Int. 2023. PMID: 37199029 Free PMC article.
Analysis of transmission-related third-generation cephalosporin-resistant Enterobacterales by electronic data mining and core genome multi-locus sequence typing.
Weber A, Neffe L, Diaz LAP, Thoma N, Aghdassi SJS, Denkel LA, Maechler F, Behnke M, Häussler S, Gastmeier P, Kola A; EMerGE-NeT Consortium. Weber A, et al. Among authors: maechler f. J Hosp Infect. 2023 Oct;140:96-101. doi: 10.1016/j.jhin.2023.07.020. Epub 2023 Aug 9. J Hosp Infect. 2023. PMID: 37562589 Free article.
25 results