Upgraded AMBER Force Field for Zinc-Binding Residues and Ligands for Predicting Structural Properties and Binding Affinities in Zinc-Proteins.
Macchiagodena M, Pagliai M, Andreini C, Rosato A, Procacci P.
Macchiagodena M, et al.
ACS Omega. 2020 Jun 16;5(25):15301-15310. doi: 10.1021/acsomega.0c01337. eCollection 2020 Jun 30.
ACS Omega. 2020.
PMID: 32637803
Free PMC article.
The new zinc-binding ASP and GLU residues, along with the CYS and HIS zinc-binding residues, parameterized in a recent work [Macchiagodena M.;J. Chem. Inf. Model.2019, 59, 3803-3816], allow users to reliably simulate 96% of the Zn-proteins available in the Protein D …
The new zinc-binding ASP and GLU residues, along with the CYS and HIS zinc-binding residues, parameterized in a recent work [Macchiagoden …