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LipidCreator workbench to probe the lipidomic landscape.
Peng B, Kopczynski D, Pratt BS, Ejsing CS, Burla B, Hermansson M, Benke PI, Tan SH, Chan MY, Torta F, Schwudke D, Meckelmann SW, Coman C, Schmitz OJ, MacLean B, Manke MC, Borst O, Wenk MR, Hoffmann N, Ahrends R. Peng B, et al. Among authors: maclean b. Nat Commun. 2020 Apr 28;11(1):2057. doi: 10.1038/s41467-020-15960-z. Nat Commun. 2020. PMID: 32345972 Free PMC article.
The ProteomeXchange consortium at 10 years: 2023 update.
Deutsch EW, Bandeira N, Perez-Riverol Y, Sharma V, Carver JJ, Mendoza L, Kundu DJ, Wang S, Bandla C, Kamatchinathan S, Hewapathirana S, Pullman BS, Wertz J, Sun Z, Kawano S, Okuda S, Watanabe Y, MacLean B, MacCoss MJ, Zhu Y, Ishihama Y, Vizcaíno JA. Deutsch EW, et al. Among authors: maclean b. Nucleic Acids Res. 2023 Jan 6;51(D1):D1539-D1548. doi: 10.1093/nar/gkac1040. Nucleic Acids Res. 2023. PMID: 36370099 Free PMC article.
Multiplexed MS/MS for improved data-independent acquisition.
Egertson JD, Kuehn A, Merrihew GE, Bateman NW, MacLean BX, Ting YS, Canterbury JD, Marsh DM, Kellmann M, Zabrouskov V, Wu CC, MacCoss MJ. Egertson JD, et al. Nat Methods. 2013 Aug;10(8):744-6. doi: 10.1038/nmeth.2528. Epub 2013 Jun 23. Nat Methods. 2013. PMID: 23793237 Free PMC article.
Skyline for Small Molecules: A Unifying Software Package for Quantitative Metabolomics.
Adams KJ, Pratt B, Bose N, Dubois LG, St John-Williams L, Perrott KM, Ky K, Kapahi P, Sharma V, MacCoss MJ, Moseley MA, Colton CA, MacLean BX, Schilling B, Thompson JW; Alzheimer’s Disease Metabolomics Consortium. Adams KJ, et al. Among authors: maclean bx. J Proteome Res. 2020 Apr 3;19(4):1447-1458. doi: 10.1021/acs.jproteome.9b00640. Epub 2020 Mar 26. J Proteome Res. 2020. PMID: 31984744 Free PMC article.
Audit logs to enforce document integrity in Skyline and Panorama.
Rohde T, Chupalov R, Shulman N, Sharma V, Eckels J, Pratt BS, MacCoss MJ, MacLean BX. Rohde T, et al. Bioinformatics. 2020 Aug 1;36(15):4366-4368. doi: 10.1093/bioinformatics/btaa547. Bioinformatics. 2020. PMID: 32467974 Free PMC article.
132 results