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Page 1
Atomic model validation using the CCP-EM software suite.
Joseph AP, Olek M, Malhotra S, Zhang P, Cowtan K, Burnley T, Winn MD. Joseph AP, et al. Acta Crystallogr D Struct Biol. 2022 Feb 1;78(Pt 2):152-161. doi: 10.1107/S205979832101278X. Epub 2022 Jan 24. Acta Crystallogr D Struct Biol. 2022. PMID: 35102881 Free PMC article.
Computational models in the service of X-ray and cryo-electron microscopy structure determination.
Kryshtafovych A, Moult J, Albrecht R, Chang GA, Chao K, Fraser A, Greenfield J, Hartmann MD, Herzberg O, Josts I, Leiman PG, Linden SB, Lupas AN, Nelson DC, Rees SD, Shang X, Sokolova ML, Tidow H; AlphaFold2 team. Kryshtafovych A, et al. Proteins. 2021 Dec;89(12):1633-1646. doi: 10.1002/prot.26223. Epub 2021 Sep 6. Proteins. 2021. PMID: 34449113 Free PMC article.
Cryo-EM targets in CASP14.
Cragnolini T, Kryshtafovych A, Topf M. Cragnolini T, et al. Proteins. 2021 Dec;89(12):1949-1958. doi: 10.1002/prot.26216. Epub 2021 Sep 16. Proteins. 2021. PMID: 34398978 Free PMC article.
Cryo-EM model validation recommendations based on outcomes of the 2019 EMDataResource challenge.
Lawson CL, Kryshtafovych A, Adams PD, Afonine PV, Baker ML, Barad BA, Bond P, Burnley T, Cao R, Cheng J, Chojnowski G, Cowtan K, Dill KA, DiMaio F, Farrell DP, Fraser JS, Herzik MA Jr, Hoh SW, Hou J, Hung LW, Igaev M, Joseph AP, Kihara D, Kumar D, Mittal S, Monastyrskyy B, Olek M, Palmer CM, Patwardhan A, Perez A, Pfab J, Pintilie GD, Richardson JS, Rosenthal PB, Sarkar D, Schäfer LU, Schmid MF, Schröder GF, Shekhar M, Si D, Singharoy A, Terashi G, Terwilliger TC, Vaiana A, Wang L, Wang Z, Wankowicz SA, Williams CJ, Winn M, Wu T, Yu X, Zhang K, Berman HM, Chiu W. Lawson CL, et al. Nat Methods. 2021 Feb;18(2):156-164. doi: 10.1038/s41592-020-01051-w. Epub 2021 Feb 4. Nat Methods. 2021. PMID: 33542514 Free PMC article.
30 results