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Page 1
Chromosome evolution and the genetic basis of agronomically important traits in greater yam.
Bredeson JV, Lyons JB, Oniyinde IO, Okereke NR, Kolade O, Nnabue I, Nwadili CO, Hřibová E, Parker M, Nwogha J, Shu S, Carlson J, Kariba R, Muthemba S, Knop K, Barton GJ, Sherwood AV, Lopez-Montes A, Asiedu R, Jamnadass R, Muchugi A, Goodstein D, Egesi CN, Featherston J, Asfaw A, Simpson GG, Doležel J, Hendre PS, Van Deynze A, Kumar PL, Obidiegwu JE, Bhattacharjee R, Rokhsar DS. Bredeson JV, et al. Among authors: lyons jb. Nat Commun. 2022 Apr 14;13(1):2001. doi: 10.1038/s41467-022-29114-w. Nat Commun. 2022. PMID: 35422045 Free PMC article.
The genome of the choanoflagellate Monosiga brevicollis and the origin of metazoans.
King N, Westbrook MJ, Young SL, Kuo A, Abedin M, Chapman J, Fairclough S, Hellsten U, Isogai Y, Letunic I, Marr M, Pincus D, Putnam N, Rokas A, Wright KJ, Zuzow R, Dirks W, Good M, Goodstein D, Lemons D, Li W, Lyons JB, Morris A, Nichols S, Richter DJ, Salamov A, Sequencing JG, Bork P, Lim WA, Manning G, Miller WT, McGinnis W, Shapiro H, Tjian R, Grigoriev IV, Rokhsar D. King N, et al. Among authors: lyons jb. Nature. 2008 Feb 14;451(7180):783-8. doi: 10.1038/nature06617. Nature. 2008. PMID: 18273011 Free PMC article.
Sequencing wild and cultivated cassava and related species reveals extensive interspecific hybridization and genetic diversity.
Bredeson JV, Lyons JB, Prochnik SE, Wu GA, Ha CM, Edsinger-Gonzales E, Grimwood J, Schmutz J, Rabbi IY, Egesi C, Nauluvula P, Lebot V, Ndunguru J, Mkamilo G, Bart RS, Setter TL, Gleadow RM, Kulakow P, Ferguson ME, Rounsley S, Rokhsar DS. Bredeson JV, et al. Among authors: lyons jb. Nat Biotechnol. 2016 May;34(5):562-70. doi: 10.1038/nbt.3535. Epub 2016 Apr 18. Nat Biotechnol. 2016. PMID: 27088722 Free article.
Genome evolution in the allotetraploid frog Xenopus laevis.
Session AM, Uno Y, Kwon T, Chapman JA, Toyoda A, Takahashi S, Fukui A, Hikosaka A, Suzuki A, Kondo M, van Heeringen SJ, Quigley I, Heinz S, Ogino H, Ochi H, Hellsten U, Lyons JB, Simakov O, Putnam N, Stites J, Kuroki Y, Tanaka T, Michiue T, Watanabe M, Bogdanovic O, Lister R, Georgiou G, Paranjpe SS, van Kruijsbergen I, Shu S, Carlson J, Kinoshita T, Ohta Y, Mawaribuchi S, Jenkins J, Grimwood J, Schmutz J, Mitros T, Mozaffari SV, Suzuki Y, Haramoto Y, Yamamoto TS, Takagi C, Heald R, Miller K, Haudenschild C, Kitzman J, Nakayama T, Izutsu Y, Robert J, Fortriede J, Burns K, Lotay V, Karimi K, Yasuoka Y, Dichmann DS, Flajnik MF, Houston DW, Shendure J, DuPasquier L, Vize PD, Zorn AM, Ito M, Marcotte EM, Wallingford JB, Ito Y, Asashima M, Ueno N, Matsuda Y, Veenstra GJ, Fujiyama A, Harland RM, Taira M, Rokhsar DS. Session AM, et al. Among authors: lyons jb. Nature. 2016 Oct 20;538(7625):336-343. doi: 10.1038/nature19840. Nature. 2016. PMID: 27762356 Free PMC article.
QTL associated with resistance to cassava brown streak and cassava mosaic diseases in a bi-parental cross of two Tanzanian farmer varieties, Namikonga and Albert.
Masumba EA, Kapinga F, Mkamilo G, Salum K, Kulembeka H, Rounsley S, Bredeson JV, Lyons JB, Rokhsar DS, Kanju E, Katari MS, Myburg AA, van der Merwe NA, Ferguson ME. Masumba EA, et al. Among authors: lyons jb. Theor Appl Genet. 2017 Oct;130(10):2069-2090. doi: 10.1007/s00122-017-2943-z. Epub 2017 Jul 13. Theor Appl Genet. 2017. PMID: 28707249 Free PMC article.
QTL Mapping for Pest and Disease Resistance in Cassava and Coincidence of Some QTL with Introgression Regions Derived from Manihot glaziovii.
Nzuki I, Katari MS, Bredeson JV, Masumba E, Kapinga F, Salum K, Mkamilo GS, Shah T, Lyons JB, Rokhsar DS, Rounsley S, Myburg AA, Ferguson ME. Nzuki I, et al. Among authors: lyons jb. Front Plant Sci. 2017 Jul 21;8:1168. doi: 10.3389/fpls.2017.01168. eCollection 2017. Front Plant Sci. 2017. PMID: 28785268 Free PMC article.
A chromosome-scale genome assembly and dense genetic map for Xenopus tropicalis.
Mitros T, Lyons JB, Session AM, Jenkins J, Shu S, Kwon T, Lane M, Ng C, Grammer TC, Khokha MK, Grimwood J, Schmutz J, Harland RM, Rokhsar DS. Mitros T, et al. Among authors: lyons jb. Dev Biol. 2019 Aug 1;452(1):8-20. doi: 10.1016/j.ydbio.2019.03.015. Epub 2019 Apr 10. Dev Biol. 2019. PMID: 30980799 Free article.
Genetic analysis and QTL mapping for multiple biotic stress resistance in cassava.
Garcia-Oliveira AL, Kimata B, Kasele S, Kapinga F, Masumba E, Mkamilo G, Sichalwe C, Bredeson JV, Lyons JB, Shah T, Muranaka S, Katari MS, Ferguson ME. Garcia-Oliveira AL, et al. Among authors: lyons jb. PLoS One. 2020 Aug 5;15(8):e0236674. doi: 10.1371/journal.pone.0236674. eCollection 2020. PLoS One. 2020. PMID: 32756600 Free PMC article.
Current status and impending progress for cassava structural genomics.
Lyons JB, Bredeson JV, Mansfeld BN, Bauchet GJ, Berry J, Boyher A, Mueller LA, Rokhsar DS, Bart RS. Lyons JB, et al. Plant Mol Biol. 2022 Jun;109(3):177-191. doi: 10.1007/s11103-020-01104-w. Epub 2021 Feb 18. Plant Mol Biol. 2022. PMID: 33604743 Free PMC article. Review.
122 results