Luo F - Search Results

1

DNA 5-methylcytosine detection and methylation phasing using PacBio circular consensus sequencing.

Ni P, Nie F, Zhong Z, Xu J, Huang N, Zhang J, Zhao H, Zou Y, Huang Y, Li J, Xiao CL, Luo F, Wang J. Ni P, et al. Among authors: luo f. Nat Commun. 2023 Jul 8;14(1):4054. doi: 10.1038/s41467-023-39784-9. Nat Commun. 2023. PMID: 37422489 Free PMC article.

2

MECAT: fast mapping, error correction, and de novo assembly for single-molecule sequencing reads.

Xiao CL, Chen Y, Xie SQ, Chen KN, Wang Y, Han Y, Luo F, Xie Z. Xiao CL, et al. Among authors: luo f. Nat Methods. 2017 Nov;14(11):1072-1074. doi: 10.1038/nmeth.4432. Epub 2017 Sep 18. Nat Methods. 2017. PMID: 28945707

3

Prediction of lncRNA-disease associations based on inductive matrix completion.

Lu C, Yang M, Luo F, Wu FX, Li M, Pan Y, Li Y, Wang J. Lu C, et al. Among authors: luo f. Bioinformatics. 2018 Oct 1;34(19):3357-3364. doi: 10.1093/bioinformatics/bty327. Bioinformatics. 2018. PMID: 29718113

4

N⁶-Methyladenine DNA Modification in the Human Genome.

Xiao CL, Zhu S, He M, Chen D, Zhang Q, Chen Y, Yu G, Liu J, Xie SQ, Luo F, Liang Z, Wang DP, Bo XC, Gu XF, Wang K, Yan GR. Xiao CL, et al. Among authors: luo f. Mol Cell. 2018 Jul 19;71(2):306-318.e7. doi: 10.1016/j.molcel.2018.06.015. Epub 2018 Jul 12. Mol Cell. 2018. PMID: 30017583 Free article.

5

Improving de novo Assembly Based on Read Classification.

Liao X, Li M, Luo J, Zou Y, Wu FX, Pan Y, Luo F, Wang J. Liao X, et al. Among authors: luo f, luo j. IEEE/ACM Trans Comput Biol Bioinform. 2020 Jan-Feb;17(1):177-188. doi: 10.1109/TCBB.2018.2861380. Epub 2018 Jul 30. IEEE/ACM Trans Comput Biol Bioinform. 2020. PMID: 30059317

6

MultiMotifMaker: A Multi-Thread Tool for Identifying DNA Methylation Motifs from Pacbio Reads.

Li T, Zhang X, Luo F, Wu FX, Wang J. Li T, et al. Among authors: luo f. IEEE/ACM Trans Comput Biol Bioinform. 2020 Jan-Feb;17(1):220-225. doi: 10.1109/TCBB.2018.2861399. Epub 2018 Jul 30. IEEE/ACM Trans Comput Biol Bioinform. 2020. PMID: 30059318

7

N6-Methyladenine DNA modification in Xanthomonas oryzae pv. oryzicola genome.

Xiao CL, Xie SQ, Xie QB, Liu ZY, Xing JF, Ji KK, Tao J, Dai LY, Luo F. Xiao CL, et al. Among authors: luo f. Sci Rep. 2018 Nov 2;8(1):16272. doi: 10.1038/s41598-018-34559-5. Sci Rep. 2018. PMID: 30389999 Free PMC article.

8

DeepSignal: detecting DNA methylation state from Nanopore sequencing reads using deep-learning.

Ni P, Huang N, Zhang Z, Wang DP, Liang F, Miao Y, Xiao CL, Luo F, Wang J. Ni P, et al. Among authors: luo f. Bioinformatics. 2019 Nov 1;35(22):4586-4595. doi: 10.1093/bioinformatics/btz276. Bioinformatics. 2019. PMID: 30994904

9

MultiGuideScan: a multi-processing tool for designing CRISPR guide RNA libraries.

Li T, Wang S, Luo F, Wu FX, Wang J. Li T, et al. Among authors: luo f. Bioinformatics. 2020 Feb 1;36(3):920-921. doi: 10.1093/bioinformatics/btz616. Bioinformatics. 2020. PMID: 31386102

10

EPGA-SC : A Framework for de novo Assembly of Single-Cell Sequencing Reads.

Liao X, Li M, Luo J, Zou Y, Wu FX, Yi-Pan, Luo F, Wang J. Liao X, et al. Among authors: luo f, luo j. IEEE/ACM Trans Comput Biol Bioinform. 2021 Jul-Aug;18(4):1492-1503. doi: 10.1109/TCBB.2019.2945761. Epub 2021 Aug 6. IEEE/ACM Trans Comput Biol Bioinform. 2021. PMID: 31603794

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