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International interlaboratory study comparing single organism 16S rRNA gene sequencing data: Beyond consensus sequence comparisons.
Olson ND, Lund SP, Zook JM, Rojas-Cornejo F, Beck B, Foy C, Huggett J, Whale AS, Sui Z, Baoutina A, Dobeson M, Partis L, Morrow JB. Olson ND, et al. Among authors: lund sp. Biomol Detect Quantif. 2015 Mar 5;3:17-24. doi: 10.1016/j.bdq.2015.01.004. eCollection 2015 Mar. Biomol Detect Quantif. 2015. PMID: 27077030 Free PMC article.
Evaluation of microbial qPCR workflows using engineered Saccharomyces cerevisiae.
Da Silva SM, Vang LK, Olson ND, Lund SP, Downey AS, Kelman Z, Salit ML, Lin NJ, Morrow JB. Da Silva SM, et al. Among authors: lund sp. Biomol Detect Quantif. 2016 Feb 19;7:27-33. doi: 10.1016/j.bdq.2016.01.001. eCollection 2016 Mar. Biomol Detect Quantif. 2016. PMID: 27077050 Free PMC article.
Summarizing performance for genome scale measurement of miRNA: reference samples and metrics.
Pine PS, Lund SP, Parsons JR, Vang LK, Mahabal AA, Cinquini L, Kelly SC, Kincaid H, Crichton DJ, Spira A, Liu G, Gower AC, Pass HI, Goparaju C, Dubinett SM, Krysan K, Stass SA, Kukuruga D, Van Keuren-Jensen K, Courtright-Lim A, Thompson KL, Rosenzweig BA, Sorbara L, Srivastava S, Salit ML. Pine PS, et al. Among authors: lund sp. BMC Genomics. 2018 Mar 6;19(1):180. doi: 10.1186/s12864-018-4496-1. BMC Genomics. 2018. PMID: 29510677 Free PMC article.
Assessing technical performance in differential gene expression experiments with external spike-in RNA control ratio mixtures.
Munro SA, Lund SP, Pine PS, Binder H, Clevert DA, Conesa A, Dopazo J, Fasold M, Hochreiter S, Hong H, Jafari N, Kreil DP, Łabaj PP, Li S, Liao Y, Lin SM, Meehan J, Mason CE, Santoyo-Lopez J, Setterquist RA, Shi L, Shi W, Smyth GK, Stralis-Pavese N, Su Z, Tong W, Wang C, Wang J, Xu J, Ye Z, Yang Y, Yu Y, Salit M. Munro SA, et al. Among authors: lund sp. Nat Commun. 2014 Sep 25;5:5125. doi: 10.1038/ncomms6125. Nat Commun. 2014. PMID: 25254650 Free article.
An international comparability study on quantification of mRNA gene expression ratios: CCQM-P103.1.
Devonshire AS, Sanders R, Whale AS, Nixon GJ, Cowen S, Ellison SL, Parkes H, Pine PS, Salit M, McDaniel J, Munro S, Lund S, Matsukura S, Sekiguchi Y, Kawaharasaki M, Granjeiro JM, Falagan-Lotsch P, Saraiva AM, Couto P, Yang I, Kwon H, Park SR, Demšar T, Žel J, Blejec A, Milavec M, Dong L, Zhang L, Sui Z, Wang J, Viroonudomphol D, Prawettongsopon C, Partis L, Baoutina A, Emslie K, Takatsu A, Akyurek S, Akgoz M, Vonsky M, Konopelko LA, Cundapi EM, Urquiza MP, Huggett JF, Foy CA. Devonshire AS, et al. Biomol Detect Quantif. 2016 Jun 6;8:15-28. doi: 10.1016/j.bdq.2016.05.003. eCollection 2016 Jun. Biomol Detect Quantif. 2016. PMID: 27335807 Free PMC article.
Certified DNA Reference Materials to Compare HER2 Gene Amplification Measurements Using Next-Generation Sequencing Methods.
Lih CJ, Si H, Das B, Harrington RD, Harper KN, Sims DJ, McGregor PM, Camalier CE, Kayserian AY, Williams PM, He HJ, Almeida JL, Lund SP, Choquette S, Cole KD. Lih CJ, et al. Among authors: lund sp. J Mol Diagn. 2016 Sep;18(5):753-761. doi: 10.1016/j.jmoldx.2016.05.008. Epub 2016 Jul 25. J Mol Diagn. 2016. PMID: 27455875 Free PMC article.
86 results