Lu Z - Search Results

1

Single-cell RNA sequencing of developing maize ears facilitates functional analysis and trait candidate gene discovery.

Xu X, Crow M, Rice BR, Li F, Harris B, Liu L, Demesa-Arevalo E, Lu Z, Wang L, Fox N, Wang X, Drenkow J, Luo A, Char SN, Yang B, Sylvester AW, Gingeras TR, Schmitz RJ, Ware D, Lipka AE, Gillis J, Jackson D. Xu X, et al. Among authors: lu z. Dev Cell. 2021 Feb 22;56(4):557-568.e6. doi: 10.1016/j.devcel.2020.12.015. Epub 2021 Jan 4. Dev Cell. 2021. PMID: 33400914 Free PMC article.

2

Combining ATAC-seq with nuclei sorting for discovery of cis-regulatory regions in plant genomes.

Lu Z, Hofmeister BT, Vollmers C, DuBois RM, Schmitz RJ. Lu Z, et al. Nucleic Acids Res. 2017 Apr 7;45(6):e41. doi: 10.1093/nar/gkw1179. Nucleic Acids Res. 2017. PMID: 27903897 Free PMC article.

3

Identification of cis-regulatory elements by chromatin structure.

Lu Z, Ricci WA, Schmitz RJ, Zhang X. Lu Z, et al. Curr Opin Plant Biol. 2018 Apr;42:90-94. doi: 10.1016/j.pbi.2018.04.004. Epub 2018 Apr 25. Curr Opin Plant Biol. 2018. PMID: 29704803 Review.

4

The DNA binding landscape of the maize AUXIN RESPONSE FACTOR family.

Galli M, Khakhar A, Lu Z, Chen Z, Sen S, Joshi T, Nemhauser JL, Schmitz RJ, Gallavotti A. Galli M, et al. Among authors: lu z. Nat Commun. 2018 Oct 30;9(1):4526. doi: 10.1038/s41467-018-06977-6. Nat Commun. 2018. PMID: 30375394 Free PMC article.

5

Monitoring the interplay between transposable element families and DNA methylation in maize.

Noshay JM, Anderson SN, Zhou P, Ji L, Ricci W, Lu Z, Stitzer MC, Crisp PA, Hirsch CN, Zhang X, Schmitz RJ, Springer NM. Noshay JM, et al. Among authors: lu z. PLoS Genet. 2019 Sep 9;15(9):e1008291. doi: 10.1371/journal.pgen.1008291. eCollection 2019 Sep. PLoS Genet. 2019. PMID: 31498837 Free PMC article.

6

The prevalence, evolution and chromatin signatures of plant regulatory elements.

Lu Z, Marand AP, Ricci WA, Ethridge CL, Zhang X, Schmitz RJ. Lu Z, et al. Nat Plants. 2019 Dec;5(12):1250-1259. doi: 10.1038/s41477-019-0548-z. Epub 2019 Nov 18. Nat Plants. 2019. PMID: 31740772

7

Widespread long-range cis-regulatory elements in the maize genome.

Ricci WA, Lu Z, Ji L, Marand AP, Ethridge CL, Murphy NG, Noshay JM, Galli M, Mejía-Guerra MK, Colomé-Tatché M, Johannes F, Rowley MJ, Corces VG, Zhai J, Scanlon MJ, Buckler ES, Gallavotti A, Springer NM, Schmitz RJ, Zhang X. Ricci WA, et al. Among authors: lu z. Nat Plants. 2019 Dec;5(12):1237-1249. doi: 10.1038/s41477-019-0547-0. Epub 2019 Nov 18. Nat Plants. 2019. PMID: 31740773 Free PMC article.

8

The Gossypium longicalyx Genome as a Resource for Cotton Breeding and Evolution.

Grover CE, Pan M, Yuan D, Arick MA, Hu G, Brase L, Stelly DM, Lu Z, Schmitz RJ, Peterson DG, Wendel JF, Udall JA. Grover CE, et al. Among authors: lu z. G3 (Bethesda). 2020 May 4;10(5):1457-1467. doi: 10.1534/g3.120.401050. G3 (Bethesda). 2020. PMID: 32122962 Free PMC article.

9

Stable unmethylated DNA demarcates expressed genes and their cis-regulatory space in plant genomes.

Crisp PA, Marand AP, Noshay JM, Zhou P, Lu Z, Schmitz RJ, Springer NM. Crisp PA, et al. Among authors: lu z. Proc Natl Acad Sci U S A. 2020 Sep 22;117(38):23991-24000. doi: 10.1073/pnas.2010250117. Epub 2020 Sep 2. Proc Natl Acad Sci U S A. 2020. PMID: 32879011 Free PMC article.

10

A Qualitative Change in the Transcriptome Occurs after the First Cell Cycle and Coincides with Lumen Establishment during MDCKII Cystogenesis.

Wang T, Kwon SH, Peng X, Urdy S, Lu Z, Schmitz RJ, Dalton S, Mostov KE, Zhao S. Wang T, et al. Among authors: lu z. iScience. 2020 Sep 29;23(10):101629. doi: 10.1016/j.isci.2020.101629. eCollection 2020 Oct 23. iScience. 2020. PMID: 33089114 Free PMC article.

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