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Access to immunology through the Gene Ontology.
Lovering RC, Camon EB, Blake JA, Diehl AD. Lovering RC, et al. Immunology. 2008 Oct;125(2):154-60. doi: 10.1111/j.1365-2567.2008.02940.x. Immunology. 2008. PMID: 18798919 Free PMC article. Review.
Improvements to cardiovascular gene ontology.
Lovering RC, Dimmer EC, Talmud PJ. Lovering RC, et al. Atherosclerosis. 2009 Jul;205(1):9-14. doi: 10.1016/j.atherosclerosis.2008.10.014. Epub 2008 Nov 1. Atherosclerosis. 2009. PMID: 19046747 Free PMC article. Review.
The representation of heart development in the gene ontology.
Khodiyar VK, Hill DP, Howe D, Berardini TZ, Tweedie S, Talmud PJ, Breckenridge R, Bhattarcharya S, Riley P, Scambler P, Lovering RC. Khodiyar VK, et al. Among authors: lovering rc. Dev Biol. 2011 Jun 1;354(1):9-17. doi: 10.1016/j.ydbio.2011.03.011. Epub 2011 Mar 17. Dev Biol. 2011. PMID: 21419760 Free PMC article.
Guidelines for the functional annotation of microRNAs using the Gene Ontology.
Huntley RP, Sitnikov D, Orlic-Milacic M, Balakrishnan R, D'Eustachio P, Gillespie ME, Howe D, Kalea AZ, Maegdefessel L, Osumi-Sutherland D, Petri V, Smith JR, Van Auken K, Wood V, Zampetaki A, Mayr M, Lovering RC. Huntley RP, et al. Among authors: lovering rc. RNA. 2016 May;22(5):667-76. doi: 10.1261/rna.055301.115. Epub 2016 Feb 25. RNA. 2016. PMID: 26917558 Free PMC article.
An expanded evaluation of protein function prediction methods shows an improvement in accuracy.
Jiang Y, Oron TR, Clark WT, Bankapur AR, D'Andrea D, Lepore R, Funk CS, Kahanda I, Verspoor KM, Ben-Hur A, Koo da CE, Penfold-Brown D, Shasha D, Youngs N, Bonneau R, Lin A, Sahraeian SM, Martelli PL, Profiti G, Casadio R, Cao R, Zhong Z, Cheng J, Altenhoff A, Skunca N, Dessimoz C, Dogan T, Hakala K, Kaewphan S, Mehryary F, Salakoski T, Ginter F, Fang H, Smithers B, Oates M, Gough J, Törönen P, Koskinen P, Holm L, Chen CT, Hsu WL, Bryson K, Cozzetto D, Minneci F, Jones DT, Chapman S, Bkc D, Khan IK, Kihara D, Ofer D, Rappoport N, Stern A, Cibrian-Uhalte E, Denny P, Foulger RE, Hieta R, Legge D, Lovering RC, Magrane M, Melidoni AN, Mutowo-Meullenet P, Pichler K, Shypitsyna A, Li B, Zakeri P, ElShal S, Tranchevent LC, Das S, Dawson NL, Lee D, Lees JG, Sillitoe I, Bhat P, Nepusz T, Romero AE, Sasidharan R, Yang H, Paccanaro A, Gillis J, Sedeño-Cortés AE, Pavlidis P, Feng S, Cejuela JM, Goldberg T, Hamp T, Richter L, Salamov A, Gabaldon T, Marcet-Houben M, Supek F, Gong Q, Ning W, Zhou Y, Tian W, Falda M, Fontana P, Lavezzo E, Toppo S, Ferrari C, Giollo M, Piovesan D, Tosatto SC, Del Pozo A, Fernández JM, Maietta P, Valencia A, Tress ML, Benso A, Di Carlo S, Politano G, Savino A… See abstract for full author list ➔ Jiang Y, et al. Among authors: lovering rc. Genome Biol. 2016 Sep 7;17(1):184. doi: 10.1186/s13059-016-1037-6. Genome Biol. 2016. PMID: 27604469 Free PMC article.
Annotation Extensions.
Huntley RP, Lovering RC. Huntley RP, et al. Among authors: lovering rc. Methods Mol Biol. 2017;1446:233-243. doi: 10.1007/978-1-4939-3743-1_17. Methods Mol Biol. 2017. PMID: 27812947
122 results