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A chromosome-level, haplotype-phased Vanilla planifolia genome highlights the challenge of partial endoreplication for accurate whole-genome assembly.
Piet Q, Droc G, Marande W, Sarah G, Bocs S, Klopp C, Bourge M, Siljak-Yakovlev S, Bouchez O, Lopez-Roques C, Lepers-Andrzejewski S, Bourgois L, Zucca J, Dron M, Besse P, Grisoni M, Jourda C, Charron C. Piet Q, et al. Among authors: lopez roques c. Plant Commun. 2022 Sep 12;3(5):100330. doi: 10.1016/j.xplc.2022.100330. Epub 2022 May 5. Plant Commun. 2022. PMID: 35617961 Free PMC article.
Whole-genome landscape of Medicago truncatula symbiotic genes.
Pecrix Y, Staton SE, Sallet E, Lelandais-Brière C, Moreau S, Carrère S, Blein T, Jardinaud MF, Latrasse D, Zouine M, Zahm M, Kreplak J, Mayjonade B, Satgé C, Perez M, Cauet S, Marande W, Chantry-Darmon C, Lopez-Roques C, Bouchez O, Bérard A, Debellé F, Muños S, Bendahmane A, Bergès H, Niebel A, Buitink J, Frugier F, Benhamed M, Crespi M, Gouzy J, Gamas P. Pecrix Y, et al. Nat Plants. 2018 Dec;4(12):1017-1025. doi: 10.1038/s41477-018-0286-7. Epub 2018 Nov 5. Nat Plants. 2018. PMID: 30397259
Population genomics of apricots unravels domestication history and adaptive events.
Groppi A, Liu S, Cornille A, Decroocq S, Bui QT, Tricon D, Cruaud C, Arribat S, Belser C, Marande W, Salse J, Huneau C, Rodde N, Rhalloussi W, Cauet S, Istace B, Denis E, Carrère S, Audergon JM, Roch G, Lambert P, Zhebentyayeva T, Liu WS, Bouchez O, Lopez-Roques C, Serre RF, Debuchy R, Tran J, Wincker P, Chen X, Pétriacq P, Barre A, Nikolski M, Aury JM, Abbott AG, Giraud T, Decroocq V. Groppi A, et al. Nat Commun. 2021 Jun 25;12(1):3956. doi: 10.1038/s41467-021-24283-6. Nat Commun. 2021. PMID: 34172741 Free PMC article.
De novo phased assembly of the Vitis riparia grape genome.
Girollet N, Rubio B, Lopez-Roques C, Valière S, Ollat N, Bert PF. Girollet N, et al. Sci Data. 2019 Jul 19;6(1):127. doi: 10.1038/s41597-019-0133-3. Sci Data. 2019. PMID: 31324816 Free PMC article.
33 results