Lopez-Acevedo O - Search Results

1

Optical Properties of Silver-Mediated DNA from Molecular Dynamics and Time Dependent Density Functional Theory.

Makkonen E, Rinke P, Lopez-Acevedo O, Chen X. Makkonen E, et al. Among authors: lopez acevedo o. Int J Mol Sci. 2018 Aug 9;19(8):2346. doi: 10.3390/ijms19082346. Int J Mol Sci. 2018. PMID: 30096923 Free PMC article.

2

Silver (I) as DNA glue: Ag(+)-mediated guanine pairing revealed by removing Watson-Crick constraints.

Swasey SM, Leal LE, Lopez-Acevedo O, Pavlovich J, Gwinn EG. Swasey SM, et al. Sci Rep. 2015 May 14;5:10163. doi: 10.1038/srep10163. Sci Rep. 2015. PMID: 25973536 Free PMC article.

3

The Role of Hydrogen Bonds in the Stabilization of Silver-Mediated Cytosine Tetramers.

Espinosa Leal LA, Karpenko A, Swasey S, Gwinn EG, Rojas-Cervellera V, Rovira C, Lopez-Acevedo O. Espinosa Leal LA, et al. J Phys Chem Lett. 2015 Oct 15;6(20):4061-6. doi: 10.1021/acs.jpclett.5b01864. Epub 2015 Sep 29. J Phys Chem Lett. 2015. PMID: 26722777 Free article.

4

Excitation-dependent fluorescence from atomic/molecular layer deposited sodium-uracil thin films.

Pale V, Giedraityte Z, Chen X, Lopez-Acevedo O, Tittonen I, Karppinen M. Pale V, et al. Among authors: lopez acevedo o. Sci Rep. 2017 Aug 1;7(1):6982. doi: 10.1038/s41598-017-07456-6. Sci Rep. 2017. PMID: 28765548 Free PMC article.

5

Silver-Mediated Double Helix: Structural Parameters for a Robust DNA Building Block.

Chen X, Karpenko A, Lopez-Acevedo O. Chen X, et al. Among authors: lopez acevedo o. ACS Omega. 2017 Oct 31;2(10):7343-7348. doi: 10.1021/acsomega.7b01089. Epub 2017 Oct 27. ACS Omega. 2017. PMID: 30023548 Free PMC article.

6

Silver-Stabilized Guanine Duplex: Structural and Optical Properties.

Chen X, Makkonen E, Golze D, Lopez-Acevedo O. Chen X, et al. Among authors: lopez acevedo o. J Phys Chem Lett. 2018 Aug 16;9(16):4789-4794. doi: 10.1021/acs.jpclett.8b01908. Epub 2018 Aug 9. J Phys Chem Lett. 2018. PMID: 30079734 Free article.

7

Real-time time-dependent density functional theory implementation of electronic circular dichroism applied to nanoscale metal-organic clusters.

Makkonen E, Rossi TP, Larsen AH, Lopez-Acevedo O, Rinke P, Kuisma M, Chen X. Makkonen E, et al. Among authors: lopez acevedo o. J Chem Phys. 2021 Mar 21;154(11):114102. doi: 10.1063/5.0038904. J Chem Phys. 2021. PMID: 33752382

8

GPAW: An open Python package for electronic structure calculations.

Mortensen JJ, Larsen AH, Kuisma M, Ivanov AV, Taghizadeh A, Peterson A, Haldar A, Dohn AO, Schäfer C, Jónsson EÖ, Hermes ED, Nilsson FA, Kastlunger G, Levi G, Jónsson H, Häkkinen H, Fojt J, Kangsabanik J, Sødequist J, Lehtomäki J, Heske J, Enkovaara J, Winther KT, Dulak M, Melander MM, Ovesen M, Louhivuori M, Walter M, Gjerding M, Lopez-Acevedo O, Erhart P, Warmbier R, Würdemann R, Kaappa S, Latini S, Boland TM, Bligaard T, Skovhus T, Susi T, Maxson T, Rossi T, Chen X, Schmerwitz YLA, Schiøtz J, Olsen T, Jacobsen KW, Thygesen KS. Mortensen JJ, et al. Among authors: lopez acevedo o. J Chem Phys. 2024 Mar 7;160(9):092503. doi: 10.1063/5.0182685. J Chem Phys. 2024. PMID: 38450733

9

Chirality and electronic structure of the thiolate-protected Au38 nanocluster.

Lopez-Acevedo O, Tsunoyama H, Tsukuda T, Häkkinen H, Aikens CM. Lopez-Acevedo O, et al. J Am Chem Soc. 2010 Jun 16;132(23):8210-8. doi: 10.1021/ja102934q. J Am Chem Soc. 2010. PMID: 20499877

10

Redox Potentials from Ab Initio Molecular Dynamics and Explicit Entropy Calculations: Application to Transition Metals in Aqueous Solution.

Caro MA, Lopez-Acevedo O, Laurila T. Caro MA, et al. J Chem Theory Comput. 2017 Aug 8;13(8):3432-3441. doi: 10.1021/acs.jctc.7b00314. Epub 2017 Jul 27. J Chem Theory Comput. 2017. PMID: 28715635

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