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ACDC: Automated Cell Detection and Counting for Time-Lapse Fluorescence Microscopy.
Rundo L, Tangherloni A, Tyson DR, Betta R, Militello C, Spolaor S, Nobile MS, Besozzi D, Lubbock ALR, Quaranta V, Mauri G, Lopez CF, Cazzaniga P. Rundo L, et al. Among authors: lopez cf. Appl Sci (Basel). 2020 Sep 2;10(18):6187. doi: 10.3390/app10186187. Epub 2020 Sep 6. Appl Sci (Basel). 2020. PMID: 34306736 Free PMC article.
An unbiased metric of antiproliferative drug effect in vitro.
Harris LA, Frick PL, Garbett SP, Hardeman KN, Paudel BB, Lopez CF, Quaranta V, Tyson DR. Harris LA, et al. Among authors: lopez cf. Nat Methods. 2016 Jun;13(6):497-500. doi: 10.1038/nmeth.3852. Epub 2016 May 2. Nat Methods. 2016. PMID: 27135974 Free PMC article.
GPU-powered model analysis with PySB/cupSODA.
Harris LA, Nobile MS, Pino JC, Lubbock ALR, Besozzi D, Mauri G, Cazzaniga P, Lopez CF. Harris LA, et al. Among authors: lopez cf. Bioinformatics. 2017 Nov 1;33(21):3492-3494. doi: 10.1093/bioinformatics/btx420. Bioinformatics. 2017. PMID: 28666314 Free PMC article.
Charting the Fragmented Landscape of Drug Synergy.
Meyer CT, Wooten DJ, Lopez CF, Quaranta V. Meyer CT, et al. Among authors: lopez cf. Trends Pharmacol Sci. 2020 Apr;41(4):266-280. doi: 10.1016/j.tips.2020.01.011. Epub 2020 Feb 26. Trends Pharmacol Sci. 2020. PMID: 32113653 Free PMC article. Review.
Selective Inhibition of JAK1 Primes STAT5-Driven Human Leukemia Cells for ATRA-Induced Differentiation.
Ramsey HE, Stengel K, Pino JC, Johnston G, Childress M, Gorska AE, Arrate PM, Fuller L, Villaume M, Fischer MA, Ferrell PB Jr, Roe CE, Zou J, Lubbock ALR, Stubbs M, Zinkel S, Irish JM, Lopez CF, Hiebert S, Savona MR. Ramsey HE, et al. Among authors: lopez cf. Target Oncol. 2021 Sep;16(5):663-674. doi: 10.1007/s11523-021-00830-5. Epub 2021 Jul 29. Target Oncol. 2021. PMID: 34324169 Free PMC article.
Programmatic modeling for biological systems.
Lubbock ALR, Lopez CF. Lubbock ALR, et al. Among authors: lopez cf. Curr Opin Syst Biol. 2021 Sep;27:100343. doi: 10.1016/j.coisb.2021.05.004. Epub 2021 May 24. Curr Opin Syst Biol. 2021. PMID: 34485764 Free PMC article.
52 results