Lopes de Oliveira PS - Search Results

1

Protein folding creates structure-based, noncontiguous consensus phosphorylation motifs recognized by kinases.

Duarte ML, Pena DA, Nunes Ferraz FA, Berti DA, Paschoal Sobreira TJ, Costa-Junior HM, Abdel Baqui MM, Disatnik MH, Xavier-Neto J, Lopes de Oliveira PS, Schechtman D. Duarte ML, et al. Among authors: lopes de oliveira ps. Sci Signal. 2014 Nov 4;7(350):ra105. doi: 10.1126/scisignal.2005412. Sci Signal. 2014. PMID: 25372052

2

Nucleosome binding peptide presents laudable biophysical and in vivo effects.

Teles K, Fernandes V, Silva I, Leite M, Grisolia C, Lobbia VR, van Ingen H, Honorato R, Lopes-de-Oliveira P, Treptow W, Santos G. Teles K, et al. Biomed Pharmacother. 2020 Jan;121:109678. doi: 10.1016/j.biopha.2019.109678. Epub 2019 Nov 25. Biomed Pharmacother. 2020. PMID: 31810135 Free article.

3

Unsaturated fatty acids as high-affinity ligands of the C-terminal Per-ARNT-Sim domain from the Hypoxia-inducible factor 3α.

Fala AM, Oliveira JF, Adamoski D, Aricetti JA, Dias MM, Dias MVB, Sforça ML, Lopes-de-Oliveira PS, Rocco SA, Caldana C, Dias SMG, Ambrosio ALB. Fala AM, et al. Among authors: lopes de oliveira ps. Sci Rep. 2015 Aug 3;5:12698. doi: 10.1038/srep12698. Sci Rep. 2015. PMID: 26237540 Free PMC article.

4

Corrigendum to "Nucleosome binding peptide presents laudable biophysical and in vivo effects" [Biomed. Pharmacother. 121 (2020) 109678].

Teles K, Fernandes V, Silva I, Leite M, Grisolia C, Lobbia VR, van Ingen H, Honorato R, Lopes-de-Oliveira P, Treptow W, Santos G. Teles K, et al. Biomed Pharmacother. 2020 Mar;123:109805. doi: 10.1016/j.biopha.2019.109805. Epub 2020 Jan 17. Biomed Pharmacother. 2020. PMID: 31956008 Free article. No abstract available.

5

Molecular mechanisms associated with xylan degradation by Xanthomonas plant pathogens.

Santos CR, Hoffmam ZB, de Matos Martins VP, Zanphorlin LM, de Paula Assis LH, Honorato RV, Lopes de Oliveira PS, Ruller R, Murakami MT. Santos CR, et al. Among authors: de matos martins vp, lopes de oliveira ps, de paula assis lh. J Biol Chem. 2014 Nov 14;289(46):32186-32200. doi: 10.1074/jbc.M114.605105. Epub 2014 Sep 29. J Biol Chem. 2014. PMID: 25266726 Free PMC article.

6

The proton and metal binding sites responsible for the pH-dependent green-red bioluminescence color tuning in firefly luciferases.

Viviani VR, Gabriel GVM, Bevilaqua VR, Simões AF, Hirano T, Lopes-de-Oliveira PS. Viviani VR, et al. Among authors: lopes de oliveira ps. Sci Rep. 2018 Dec 4;8(1):17594. doi: 10.1038/s41598-018-33252-x. Sci Rep. 2018. PMID: 30514851 Free PMC article.

7

Extracellular matrix stiffness regulates degradation of MST2 via SCF ^βTrCP.

Fiore APZP, Rodrigues AM, Ribeiro-Filho HV, Manucci AC, de Freitas Ribeiro P, Botelho MCS, Vogel C, Lopes-de-Oliveira PS, Pagano M, Bruni-Cardoso A. Fiore APZP, et al. Among authors: lopes de oliveira ps. Biochim Biophys Acta Gen Subj. 2022 Dec;1866(12):130238. doi: 10.1016/j.bbagen.2022.130238. Epub 2022 Aug 28. Biochim Biophys Acta Gen Subj. 2022. PMID: 36044955 Free PMC article.

8

pyKVFinder: an efficient and integrable Python package for biomolecular cavity detection and characterization in data science.

Guerra JVDS, Ribeiro-Filho HV, Jara GE, Bortot LO, Pereira JGC, Lopes-de-Oliveira PS. Guerra JVDS, et al. Among authors: lopes de oliveira ps. BMC Bioinformatics. 2021 Dec 20;22(1):607. doi: 10.1186/s12859-021-04519-4. BMC Bioinformatics. 2021. PMID: 34930115 Free PMC article.

9

Cryo-EM structure of the mature and infective Mayaro virus at 4.4 Å resolution reveals features of arthritogenic alphaviruses.

Ribeiro-Filho HV, Coimbra LD, Cassago A, Rocha RPF, Guerra JVDS, de Felicio R, Carnieli CM, Leme L, Padilha AC, Paes Leme AF, Trivella DBB, Portugal RV, Lopes-de-Oliveira PS, Marques RE. Ribeiro-Filho HV, et al. Among authors: lopes de oliveira ps. Nat Commun. 2021 May 24;12(1):3038. doi: 10.1038/s41467-021-23400-9. Nat Commun. 2021. PMID: 34031424 Free PMC article.

10

Structural dynamics of SARS-CoV-2 nucleocapsid protein induced by RNA binding.

Ribeiro-Filho HV, Jara GE, Batista FAH, Schleder GR, Costa Tonoli CC, Soprano AS, Guimarães SL, Borges AC, Cassago A, Bajgelman MC, Marques RE, Trivella DBB, Franchini KG, Figueira ACM, Benedetti CE, Lopes-de-Oliveira PS. Ribeiro-Filho HV, et al. Among authors: lopes de oliveira ps. PLoS Comput Biol. 2022 May 12;18(5):e1010121. doi: 10.1371/journal.pcbi.1010121. eCollection 2022 May. PLoS Comput Biol. 2022. PMID: 35551296 Free PMC article.

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