Livi CM - Search Results

1

Protein-specific prediction of mRNA binding using RNA sequences, binding motifs and predicted secondary structures.

Livi CM, Blanzieri E. Livi CM, et al. BMC Bioinformatics. 2014 Apr 29;15:123. doi: 10.1186/1471-2105-15-123. BMC Bioinformatics. 2014. PMID: 24780077 Free PMC article.

2

Advances in the characterization of RNA-binding proteins.

Marchese D, de Groot NS, Lorenzo Gotor N, Livi CM, Tartaglia GG. Marchese D, et al. Among authors: livi cm. Wiley Interdiscip Rev RNA. 2016 Nov;7(6):793-810. doi: 10.1002/wrna.1378. Epub 2016 Aug 8. Wiley Interdiscip Rev RNA. 2016. PMID: 27503141 Free PMC article. Review.

3

Protein aggregation, structural disorder and RNA-binding ability: a new approach for physico-chemical and gene ontology classification of multiple datasets.

Klus P, Ponti RD, Livi CM, Tartaglia GG. Klus P, et al. Among authors: livi cm. BMC Genomics. 2015 Dec 16;16:1071. doi: 10.1186/s12864-015-2280-z. BMC Genomics. 2015. PMID: 26673865 Free PMC article.

4

Discovery of protein-RNA networks.

Cirillo D, Livi CM, Agostini F, Tartaglia GG. Cirillo D, et al. Among authors: livi cm. Mol Biosyst. 2014 Jul;10(7):1632-42. doi: 10.1039/c4mb00099d. Epub 2014 Apr 23. Mol Biosyst. 2014. PMID: 24756571 Review.

5

A Computational Approach for the Discovery of Protein-RNA Networks.

Marchese D, Livi CM, Tartaglia GG. Marchese D, et al. Among authors: livi cm. Methods Mol Biol. 2016;1358:29-39. doi: 10.1007/978-1-4939-3067-8_2. Methods Mol Biol. 2016. PMID: 26463375

6

catRAPID signature: identification of ribonucleoproteins and RNA-binding regions.

Livi CM, Klus P, Delli Ponti R, Tartaglia GG. Livi CM, et al. Bioinformatics. 2016 Mar 1;32(5):773-5. doi: 10.1093/bioinformatics/btv629. Epub 2015 Oct 31. Bioinformatics. 2016. PMID: 26520853 Free PMC article.

7

Constitutive patterns of gene expression regulated by RNA-binding proteins.

Cirillo D, Marchese D, Agostini F, Livi CM, Botta-Orfila T, Tartaglia GG. Cirillo D, et al. Among authors: livi cm. Genome Biol. 2014 Jan 2;15(1):R13. doi: 10.1186/gb-2014-15-1-r13. Genome Biol. 2014. PMID: 24401680 Free PMC article.

8

ccSOL omics: a webserver for solubility prediction of endogenous and heterologous expression in Escherichia coli.

Agostini F, Cirillo D, Livi CM, Delli Ponti R, Tartaglia GG. Agostini F, et al. Among authors: livi cm. Bioinformatics. 2014 Oct 15;30(20):2975-7. doi: 10.1093/bioinformatics/btu420. Epub 2014 Jul 1. Bioinformatics. 2014. PMID: 24990610 Free PMC article.

9

Principles of self-organization in biological pathways: a hypothesis on the autogenous association of alpha-synuclein.

Zanzoni A, Marchese D, Agostini F, Bolognesi B, Cirillo D, Botta-Orfila M, Livi CM, Rodriguez-Mulero S, Tartaglia GG. Zanzoni A, et al. Among authors: livi cm. Nucleic Acids Res. 2013 Dec;41(22):9987-98. doi: 10.1093/nar/gkt794. Epub 2013 Sep 3. Nucleic Acids Res. 2013. PMID: 24003031 Free PMC article.

10

Discovering the 3' UTR-mediated regulation of alpha-synuclein.

Marchese D, Botta-Orfila T, Cirillo D, Rodriguez JA, Livi CM, Fernández-Santiago R, Ezquerra M, Martí MJ, Bechara E, Tartaglia GG; Catalan MSA Registry (CMSAR). Marchese D, et al. Among authors: livi cm. Nucleic Acids Res. 2017 Dec 15;45(22):12888-12903. doi: 10.1093/nar/gkx1048. Nucleic Acids Res. 2017. PMID: 29149290 Free PMC article.

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