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Analyses of pig genomes provide insight into porcine demography and evolution.
Groenen MA, Archibald AL, Uenishi H, Tuggle CK, Takeuchi Y, Rothschild MF, Rogel-Gaillard C, Park C, Milan D, Megens HJ, Li S, Larkin DM, Kim H, Frantz LA, Caccamo M, Ahn H, Aken BL, Anselmo A, Anthon C, Auvil L, Badaoui B, Beattie CW, Bendixen C, Berman D, Blecha F, Blomberg J, Bolund L, Bosse M, Botti S, Bujie Z, Bystrom M, Capitanu B, Carvalho-Silva D, Chardon P, Chen C, Cheng R, Choi SH, Chow W, Clark RC, Clee C, Crooijmans RP, Dawson HD, Dehais P, De Sapio F, Dibbits B, Drou N, Du ZQ, Eversole K, Fadista J, Fairley S, Faraut T, Faulkner GJ, Fowler KE, Fredholm M, Fritz E, Gilbert JG, Giuffra E, Gorodkin J, Griffin DK, Harrow JL, Hayward A, Howe K, Hu ZL, Humphray SJ, Hunt T, Hornshøj H, Jeon JT, Jern P, Jones M, Jurka J, Kanamori H, Kapetanovic R, Kim J, Kim JH, Kim KW, Kim TH, Larson G, Lee K, Lee KT, Leggett R, Lewin HA, Li Y, Liu W, Loveland JE, Lu Y, Lunney JK, Ma J, Madsen O, Mann K, Matthews L, McLaren S, Morozumi T, Murtaugh MP, Narayan J, Nguyen DT, Ni P, Oh SJ, Onteru S, Panitz F, Park EW, Park HS, Pascal G, Paudel Y, Perez-Enciso M, Ramirez-Gonzalez R, Reecy JM, Rodriguez-Zas S, Rohrer GA, Rund L, Sang Y, Schachtschneider K, Schraiber JG, Schwartz J, Scobie L… See abstract for full author list ➔ Groenen MA, et al. Among authors: liu w. Nature. 2012 Nov 15;491(7424):393-8. doi: 10.1038/nature11622. Nature. 2012. PMID: 23151582 Free PMC article.
Radiation hybrid map of the porcine genome comprising 2035 EST loci.
Rink A, Eyer K, Roelofs B, Priest KJ, Sharkey-Brockmeier KJ, Lekhong S, Karajusuf EK, Bang J, Yerle M, Milan D, Liu WS, Beattie CW. Rink A, et al. Among authors: liu ws. Mamm Genome. 2006 Aug;17(8):878-85. doi: 10.1007/s00335-005-0121-0. Epub 2006 Aug 4. Mamm Genome. 2006. PMID: 16897346
An integrated RH map of porcine chromosome 10.
Ma JG, Yasue H, Eyer KE, Hiraiwa H, Shimogiri T, Meyers SN, Beever JE, Schook LB, Beattie CW, Liu WS. Ma JG, et al. Among authors: liu ws. BMC Genomics. 2009 May 8;10:211. doi: 10.1186/1471-2164-10-211. BMC Genomics. 2009. PMID: 19426492 Free PMC article.
Worldwide patterns of ancestry, divergence, and admixture in domesticated cattle.
Decker JE, McKay SD, Rolf MM, Kim J, Molina Alcalá A, Sonstegard TS, Hanotte O, Götherström A, Seabury CM, Praharani L, Babar ME, Correia de Almeida Regitano L, Yildiz MA, Heaton MP, Liu WS, Lei CZ, Reecy JM, Saif-Ur-Rehman M, Schnabel RD, Taylor JF. Decker JE, et al. PLoS Genet. 2014 Mar 27;10(3):e1004254. doi: 10.1371/journal.pgen.1004254. eCollection 2014 Mar. PLoS Genet. 2014. PMID: 24675901 Free PMC article.
A radiation hybrid map for the bovine Y Chromosome.
Liu WS, Mariani P, Beattie CW, Alexander LJ, Ponce De León FA. Liu WS, et al. Mamm Genome. 2002 Jun;13(6):320-6. doi: 10.1007/s00335-001-2133-8. Mamm Genome. 2002. PMID: 12115036
Enhanced bovine genome annotation through integration of transcriptomics and epi-transcriptomics datasets facilitates genomic biology.
Beiki H, Murdoch BM, Park CA, Kern C, Kontechy D, Becker G, Rincon G, Jiang H, Zhou H, Thorne J, Koltes JE, Michal JJ, Davenport K, Rijnkels M, Ross PJ, Hu R, Corum S, McKay S, Smith TPL, Liu W, Ma W, Zhang X, Xu X, Han X, Jiang Z, Hu ZL, Reecy JM. Beiki H, et al. Among authors: liu w. Gigascience. 2024 Jan 2;13:giae019. doi: 10.1093/gigascience/giae019. Gigascience. 2024. PMID: 38626724 Free PMC article.
The molecular evolution of PL10 homologs.
Chang TC, Liu WS. Chang TC, et al. BMC Evol Biol. 2010 May 3;10:127. doi: 10.1186/1471-2148-10-127. BMC Evol Biol. 2010. PMID: 20438638 Free PMC article.
The expansion of the PRAME gene family in Eutheria.
Chang TC, Yang Y, Yasue H, Bharti AK, Retzel EF, Liu WS. Chang TC, et al. PLoS One. 2011 Feb 10;6(2):e16867. doi: 10.1371/journal.pone.0016867. PLoS One. 2011. PMID: 21347312 Free PMC article.
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